RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 DAPL1A0PJW8 107 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 OR52A4PA6NMU1 304 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 PGRMC2O15173 223 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 AKAP8O43823 692 aaKnown RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 HPGDSO60760 199 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 OR5F1O95221 314 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 HLA-DPB1P04440 258 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 SCG5P05408 212 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 GNSP15586 552 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CSNK2A2P19784 350 aaPredicted RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 LIM2P55344 173 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 WNT4P56705 351 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 RPS25P62851 125 aaKnown RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 SLC7A9P82251 487 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 ZNF33BQ06732 778 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 DHCR24Q15392 516 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 SEC23BQ15437 767 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 TCTN1Q2MV58 587 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 BTBD16Q32M84 506 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 HENMT1Q5T8I9 393 aaKnown RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 FAM71E1Q6IPT2 247 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 TCTN3Q6NUS6 607 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CNKSR3Q6P9H4 555 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 SLC36A4Q6YBV0 504 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 Q6ZNB5 142 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CADM2Q8N3J6 435 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 KLHL36Q8N4N3 616 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 ZNF433Q8N7K0 673 aaPredicted RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 ANKK1Q8NFD2 765 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 OR6T1Q8NGN1 323 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 ARSGQ96EG1 525 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 OPALINQ96PE5 141 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 MCHR1Q99705 422 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CTRCQ99895 268 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 IFT27Q9BW83 186 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 C11orf54Q9H0W9 315 aaPredicted RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 MED28Q9H204 178 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 MVB12BQ9H7P6 319 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 TXNL4BQ9NX01 149 aaKnown RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 EXTL2Q9UBQ6 330 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 GTF2A1LQ9UNN4 478 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 ZNF646O15015 1829 aaPredicted RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 TET1Q8NFU7 2136 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 PDCD11Q14690 1871 aaKnown RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 NYNRINQ9P2P1 1898 aaKnown RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 A0A0G2JMZ2 1700 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 LRRC37A2A6NM11 1700 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 LOC102723532A0A0G2JNH3 316 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 A0A1W2PQ72 361 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 SLC5A10A0PJK1 596 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 C1orf226A1L170 272 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 FAM172BPA6NC97 362 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 IGLON5A6NGN9 336 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 LRRC72A6NJI9 287 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 INMT-MINDY4F8WBC2 141 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 H3BSH0 61 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 J3QLW9 94 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 PLPP1O14494 284 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CHST10O43529 356 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 REM1O75628 298 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 ZNF19P17023 458 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 MPIP34949 423 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 HTR2BP41595 481 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 GCGRP47871 477 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CCR4P51679 360 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 WDR5P61964 334 aaKnown RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 BTN3A2P78410 334 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 DBPQ10586 325 aaPredicted RBP4.49□□□□□ -1.69
USP44-201ENST00000258499 CDKN3Q16667 212 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 TCEAL5Q5H9L2 206 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 MEDAGQ5VYS4 303 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 ACSM5Q6NUN0 579 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 MTFR2Q6P444 385 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 IL20RBQ6UXL0 311 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 UNC5DQ6UXZ4 953 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 PHC2Q8IXK0 858 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 NRMQ8IXM6 262 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 SAMD12Q8N8I0 201 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 PROKR2Q8NFJ6 384 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 OR14C36Q8NHC7 312 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 GRHL3Q8TE85 626 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 POF1BQ8WVV4 589 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 DTD2Q96FN9 168 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 C16orf58Q96GQ5 468 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 ZNF354BQ96LW1 612 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 HOXD1Q9GZZ0 328 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CERS4Q9HA82 394 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 SLC35C2Q9NQQ7 365 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 PLCXD1Q9NUJ7 323 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 MCUBQ9NWR8 336 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 TAS2R7Q9NYW3 318 aa4.49□□□□□ -1.69
USP44-201ENST00000258499 CEP290O15078 2479 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3DA0A087WVF3 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3IA0A087WXS9 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3EA0A087X179 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3KA0A087X1G2 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3FA6NER0 549 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 ZAR1LA6NP61 321 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3LB9A6J9 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 SMLR1H3BR10 107 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms