RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 KRT4P19013 534 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 DNAJA1P31689 397 aaKnown RBP11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 NEK2P51955 445 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 DLX5P56178 289 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 SLC18A2Q05940 514 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 RPS6KA2Q15349 733 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 KRT71Q3SY84 523 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 BEND6Q5SZJ8 279 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 TTC19Q6DKK2 380 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 C4orf33Q8N1A6 199 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 ZIM3Q96PE6 472 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 SECISBP2Q96T21 854 aaKnown RBP11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 POLDIP3Q9BY77 421 aaKnown RBP11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 CXorf21Q9HAI6 301 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 AHSPQ9NZD4 102 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 DCDC2Q9UHG0 476 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 EMCNQ9ULC0 261 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 EDARQ9UNE0 448 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 NPFFR2Q9Y5X5 522 aa11.85□□□□□ -0.51
APOBEC3A-201ENST00000249116 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 WASHC1A8K0Z3 465 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 COPEO14579 308 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 TRIM3O75382 744 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 TRAPPC6AO75865 159 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 EPPINO95925 133 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 GBAP04062 536 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 CLPSP04118 112 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 RPS17P08708 135 aaKnown RBP11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 TAC1P20366 129 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 SSTR4P31391 388 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 UQCRC1P31930 480 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 CRHR1P34998 444 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 KIR2DL3P43628 341 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 MASP1P48740 699 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 CCNG1P51959 295 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 DUSP8Q13202 625 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 C10orf62Q5T681 223 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 ZZZ3Q8IYH5 903 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 PM20D2Q8IYS1 436 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 ZNF441Q8N8Z8 693 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 OR4K14Q8NGD5 310 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 SPPL2AQ8TCT8 520 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 NINJ1Q92982 152 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 NOL11Q9H8H0 719 aaKnown RBP11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 MKS1Q9NXB0 559 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 PCTPQ9UKL6 214 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 DCHS2Q6V1P9 2916 aa11.84□□□□□ -0.51
APOBEC3A-201ENST00000249116 F8P00451 2351 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 SYT5O00445 386 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 PGRMC2O15173 223 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 GUCY1B2O75343 617 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 CTAG2O75638 210 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 IL2RAP01589 272 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 BMP5P22003 454 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 CCT5P48643 541 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 ASCL1P50553 236 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 IST1P53990 364 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 FBXW4P57775 412 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 FUT7Q11130 342 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 IFT88Q13099 833 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 TMEM64Q6YI46 380 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 LACC1Q8IV20 430 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 C17orf47Q8NEP4 570 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 HSPBAP1Q96EW2 488 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 RILPQ96NA2 401 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 CDK15Q96Q40 435 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 TIMP4Q99727 224 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 ANGPTL4Q9BY76 406 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 OR10A5Q9H207 317 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 TEX10Q9NXF1 929 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 FOXD3Q9UJU5 478 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 ADAM29Q9UKF5 820 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 GRID1Q9ULK0 1009 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 ZNF407Q9C0G0 2248 aa11.83□□□□□ -0.52
APOBEC3A-201ENST00000249116 OR7A17O14581 309 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 DLX3O60479 287 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 PLIN3O60664 434 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 PROCP04070 461 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 HPNP05981 417 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 KLK1P06870 262 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 PORP16435 677 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 NT5EP21589 574 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 ATP5F1P24539 256 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 CEACAM8P31997 349 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 TIMP3P35625 211 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 CDK9P50750 372 aaKnown RBP11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 XKP51811 444 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 CRYZQ08257 329 aaKnown RBP11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 TOMM20Q15388 145 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 CCDC153Q494R4 210 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 ACSF3Q4G176 576 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 CEP85LQ5SZL2 805 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 CCNYL2Q5T2Q4 361 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 FRG2Q64ET8 278 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 LRIG3Q6UXM1 1119 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 SEM1Q6ZVN7 128 aa11.82□□□□□ -0.52
APOBEC3A-201ENST00000249116 BANPQ8N9N5 519 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms