RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 V9GYQ6 96 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 CYR61O00622 381 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 DCAF7P61962 342 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 FLOT2Q14254 428 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 LARS2Q15031 903 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 TBC1D25Q3MII6 688 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 COQ5Q5HYK3 327 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 RRM2BQ7LG56 351 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 B3GNT7Q8NFL0 401 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 CNRIP1Q96F85 164 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 JSRP1Q96MG2 331 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 CCDC115Q96NT0 180 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC39A3Q9BRY0 314 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 PACSIN3Q9UKS6 424 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 AURKCQ9UQB9 309 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 MSRB2Q9Y3D2 182 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 NEUROG3Q9Y4Z2 214 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 A8MVJ9 347 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 HMGN2P05204 90 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR12D1P0DN82 309 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 AQP1P29972 269 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 SSTR4P31391 388 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 CDK9P50750 372 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 PDX1P52945 283 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 LIPEQ05469 1076 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 GPR68Q15743 365 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 ANKRD37Q7Z713 158 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 PEX5LQ8IYB4 626 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 HORMAD2Q8N7B1 307 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF527Q8NB42 609 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 RBM15BQ8NDT2 890 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC2A12Q8TD20 617 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 SFXN5Q8TD22 340 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 ELP4Q96EB1 424 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 OTUB1Q96FW1 271 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 TEX37Q96LM6 180 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 G6PC3Q9BUM1 346 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR51I1Q9H343 314 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 METTL7AQ9H8H3 244 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 CXorf21Q9HAI6 301 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZBTB20Q9HC78 741 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 HPF1Q9NWY4 346 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 TAS2R7Q9NYW3 318 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 SEC14L3Q9UDX4 400 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 ELOVL7A1L3X0 281 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 DNAJA2O60884 412 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 ITPKBP27987 946 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 COPZ1P61923 177 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 RPS26P62854 115 aaKnown RBP10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 TXNL4AP83876 142 aaKnown RBP10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 FADDQ13158 208 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 NKD1Q969G9 470 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 PMEPA1Q969W9 287 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 TPD52L3Q96J77 140 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 YY1AP1Q9H869 796 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 KLRF1Q9NZS2 232 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 PCDHB14Q9Y5E9 798 aa10.4□□□□□ -0.75
TNFAIP3-201ENST00000237289 PMS2P1A4D2B8 440 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 WWP2O00308 870 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 UCNP55089 124 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 RAPSNQ13702 412 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 PAGE3Q5JUK9 113 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 CLEC4FQ8N1N0 589 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 SPPL2AQ8TCT8 520 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 THAP4Q8WY91 577 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 ALG2Q9H553 416 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 PRPF19Q9UMS4 504 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 WDR45Q9Y484 360 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 URB1O60287 2271 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 SCDO00767 359 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 DNAJB6O75190 326 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 PDE5AO76074 875 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 AK1P00568 194 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 IL7RP16871 459 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 IL12AP29459 219 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 ARG2P78540 354 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZNF385BQ569K4 471 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 DHFR2Q86XF0 187 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 TGIF2Q9GZN2 237 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 EXO5Q9H790 373 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 FBXL4Q9UKA2 621 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 LIPT1Q9Y234 373 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 TMEM131Q92545 1883 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 C4orf51C9J302 202 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 TM4SF5O14894 197 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 BCHEP06276 602 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 CYC1P08574 325 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 TRMT12Q53H54 448 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 RPS19BP1Q86WX3 136 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 NUDT8Q8WV74 236 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 GTF2H4Q92759 462 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 TMCO6Q96DC7 493 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 FAM117AQ9C073 453 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 AKIRIN1Q9H9L7 192 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 KMT2EQ8IZD2 1858 aa10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 SPTBN5Q9NRC6 3674 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-201ENST00000237289 LOC101059948A0A1B0GTJ6 334 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 CFAP73A6NFT4 308 aa10.38□□□□□ -0.75
TNFAIP3-201ENST00000237289 SCARB2Q14108 478 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms