RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 RIMKLAQ8IXN7 391 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 CPSF7Q8N684 471 aaKnown RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 OR9A2Q8NGT5 310 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 CLHC1Q8NHS4 586 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 NR4A3Q92570 626 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 KAT2AQ92830 837 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 GFM2Q969S9 779 aaKnown RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 FAIM2Q9BWQ8 316 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 NXF5Q9H1B4 397 aaKnown RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 GLIPR2Q9H4G4 154 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 ABI3Q9P2A4 366 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 RAP2CQ9Y3L5 183 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 B4DXG7 233 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 ANKRD28O15084 1053 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 RGS14O43566 566 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 PEX11AO75192 247 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 SEMA7AO75326 666 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 CRCPO75575 148 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 FBXO45P0C2W1 286 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 CCL3P10147 92 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 COX7A2P14406 83 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 RPL38P63173 70 aaKnown RBP12.66□□□□□ -0.38
VEGFA-201ENST00000230480 OCRLQ01968 901 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 STX3Q13277 289 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 IMPG1Q17R60 797 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 GALNTL6Q49A17 601 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 NPSR1Q6W5P4 371 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 RNF111Q6ZNA4 994 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 LRRC25Q8N386 305 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-201ENST00000230480 C7orf57Q8NEG2 295 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 MGARPQ8TDB4 240 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 CIDECQ96AQ7 238 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-201ENST00000230480 ZNF764Q96H86 408 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-201ENST00000230480 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 TSSK3Q96PN8 268 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 CCT7Q99832 543 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 ITPAQ9BY32 194 aa12.66□□□□□ -0.38
VEGFA-201ENST00000230480 EML4Q9HC35 981 aaKnown RBP12.66□□□□□ -0.38
VEGFA-201ENST00000230480 WBP11Q9Y2W2 641 aaKnown RBP12.66□□□□□ -0.38
VEGFA-201ENST00000230480 CHCHD2Q9Y6H1 151 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-201ENST00000230480 FCHO1O14526 889 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 AKAP10O43572 662 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 PLOD3O60568 738 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 LRATO95237 230 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 RASAL1O95294 804 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 CT45A8P0DMV1 189 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 CT45A9P0DMV2 189 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 NEFHP12036 1026 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 GRK2P25098 689 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 RFC3P40938 356 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 MAP3K8P41279 467 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 GSTM5P46439 218 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 RPL14P50914 215 aaKnown RBP12.65□□□□□ -0.38
VEGFA-201ENST00000230480 GYS2P54840 703 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 PHC1P78364 1004 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 PTGR1Q14914 329 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 HEPACAMQ14CZ8 416 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 INAQ16352 499 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 MAPKAPK3Q16644 382 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 CT45A2Q5DJT8 189 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 EXOSC6Q5RKV6 272 aaKnown RBP12.65□□□□□ -0.38
VEGFA-201ENST00000230480 FNDC7Q5VTL7 733 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 LARP4Q71RC2 724 aaKnown RBP eCLIP12.65□□□□□ -0.381e-25■□□□□ 10.3
VEGFA-201ENST00000230480 ZNF551Q7Z340 670 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-201ENST00000230480 DDIASQ8IXT1 998 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 CYP4Z2PQ8N1L4 340 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 VWA5B2Q8N398 1253 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 KRTCAP2Q8N6L1 136 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 ZFP62Q8NB50 900 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-201ENST00000230480 ST6GALNAC3Q8NDV1 305 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 PSD4Q8NDX1 1056 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 OR7G1Q8NGA0 311 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 OR52R1Q8NGF1 315 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 OR5L2Q8NGL0 311 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 HOXB13Q92826 284 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-201ENST00000230480 TP53INP1Q96A56 240 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 ART5Q96L15 291 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 ATP6V1G3Q96LB4 118 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 VSTM2LQ96N03 204 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 C1orf50Q9BV19 199 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 AKTIPQ9H8T0 292 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 ATP6V1HQ9UI12 483 aa12.65□□□□□ -0.38
VEGFA-201ENST00000230480 CNOT11Q9UKZ1 510 aaKnown RBP12.65□□□□□ -0.38
VEGFA-201ENST00000230480 GPR55Q9Y2T6 319 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-201ENST00000230480 NCOA6Q14686 2063 aaPredicted RBP12.65□□□□□ -0.39
VEGFA-201ENST00000230480 GOLGA6L10A6NI86 522 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 OR6C76A6NM76 312 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 G3V3Y1 287 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 UPK1AO00322 258 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 PLOD2O00469 737 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 SDHDO14521 159 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 PEX1O43933 1283 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 GLSO94925 669 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-201ENST00000230480 HSPA4LO95757 839 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 LAMP1P11279 417 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 CD46P15529 392 aa12.64□□□□□ -0.39
VEGFA-201ENST00000230480 EFNA1P20827 205 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms