RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PLEKHN1Q494U1 663 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 GLT8D1Q68CQ7 371 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 NADSYN1Q6IA69 706 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 RPL13AP3Q6NVV1 102 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 WDR45Q9Y484 360 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 A0A0D9SEW6 157 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 ARPC1BO15143 372 aaKnown RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 NDUFV2P19404 249 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 CD34P28906 385 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 METAP1DQ6UB28 335 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 TEX26Q8N6G2 289 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 LMLNQ96KR4 655 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 FBXO8Q9NRD0 319 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 THSD1Q9NS62 852 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 CORINQ9Y5Q5 1042 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PRAMEF2O60811 474 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 UBXN7O94888 489 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 DPP6P42658 865 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 VSX2P58304 361 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 POU4F2Q12837 409 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 OR2AP1Q8NGE2 309 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 LCN9Q8WX39 176 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 NSMAFQ92636 917 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 SLC35B4Q969S0 331 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PSORS1C1Q9UIG5 152 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 LAMP5Q9UJQ1 280 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 A0A0U1RQF3 1178 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 CLDN4O14493 209 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 ARHGAP33O14559 1287 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 SLC22A5O76082 557 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PTH2RP49190 550 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 ACTA2P62736 377 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 ACTG2P63267 376 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 ZXDBP98169 803 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 RASGEF1BQ0VAM2 473 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 MTFR2Q6P444 385 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 APIPQ96GX9 242 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 NEURL2Q9BR09 285 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 EIF1AYO14602 144 aaKnown RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 ANKRD28O15084 1053 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 MPC1LP0DKB6 136 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 EIF1AXP47813 144 aaKnown RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 CLCN7P51798 805 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PTRH1Q86Y79 214 aaKnown RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PNPLA1Q8N8W4 532 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 RAB11FIP5Q9BXF6 653 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 C11orf54Q9H0W9 315 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 RDH14Q9HBH5 336 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 MYNNQ9NPC7 610 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 SLC16A6O15403 523 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 OAZ2O95190 189 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 IFNA17P01571 189 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 SRCP12931 536 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 ARSBP15848 533 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 MMP12P39900 470 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 MAGEA3P43357 314 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 DAPP51397 102 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 GFOD2Q3B7J2 385 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 TMEM205Q6UW68 189 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
HCFC2-201ENST00000229330 GDPD4Q6W3E5 623 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 PELI3Q8N2H9 469 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 PCNPQ8WW12 178 aaKnown RBP13.15□□□□□ -0.3
HCFC2-201ENST00000229330 SORCS1Q8WY21 1168 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 POLHQ9Y253 713 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 SLC43A1O75387 559 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 NUDT7P0C024 238 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 C8orf89P0DMQ9 161 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 ARSAP15289 507 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 RPS26P62854 115 aaKnown RBP13.15□□□□□ -0.3
HCFC2-201ENST00000229330 CDC20Q12834 499 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 C6orf120Q7Z4R8 191 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.3
HCFC2-201ENST00000229330 PMM1Q92871 262 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 RBPMSQ93062 196 aaKnown RBP13.15□□□□□ -0.3
HCFC2-201ENST00000229330 FANCFQ9NPI8 374 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 NUP98P52948 1817 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 EEF1E1-BLOC1S5C9J1V9 151 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 ANHXE9PGG2 379 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 PRSS56P0CW18 603 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 ACRV1P26436 265 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 TOMM20Q15388 145 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 CBLL1Q75N03 491 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 MOAP1Q96BY2 351 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF649Q9BS31 505 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 RBMXP38159 391 aaKnown RBP13.15□□□□□ -0.3
HCFC2-201ENST00000229330 NAA10P41227 235 aaPredicted RBP13.15□□□□□ -0.3
HCFC2-201ENST00000229330 DOC2AQ14183 400 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 GPR150Q8NGU9 434 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 OR56A3Q8NH54 315 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 NT5C3BQ969T7 300 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 CENPMQ9NSP4 180 aa13.15□□□□□ -0.3
HCFC2-201ENST00000229330 LCMT2O60294 686 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms