RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 LILRA5A6NI73 299 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 EML2O95834 649 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 B3GALT4O96024 378 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 NUDT7P0C024 238 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 NME1P15531 152 aaKnown RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ALOX12P18054 663 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 GPC1P35052 558 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 XCR1P46094 333 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 KHKP50053 298 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ISL1P61371 349 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 HNRNPKP61978 463 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 BTN3A2P78410 334 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 VLDLRP98155 873 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 INSM1Q01101 510 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 MICAQ29983 383 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ZBED5Q49AG3 693 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 COX20Q5RI15 118 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 RNF220Q5VTB9 566 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF691Q5VV52 312 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 GARNL3Q5VVW2 1013 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ANGPTL8Q6UXH0 198 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 VN1R4Q7Z5H5 301 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 TOR1AIP2Q8NFQ8 470 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 CCL4L1Q8NHW4 92 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 NFKBIDQ8NI38 313 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF420Q8TAQ5 688 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ZDHHC1Q8WTX9 485 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 SLC38A5Q8WUX1 472 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 PROX1Q92786 737 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ELP4Q96EB1 424 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 TCTN2Q96GX1 697 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 TPD52L3Q96J77 140 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 MAGED4Q96JG8 741 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF354BQ96LW1 612 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 BBC3Q96PG8 261 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 PIP5K1AQ99755 562 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 SORBS1Q9BX66 1292 aaKnown RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 AICDAQ9GZX7 198 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ING2Q9H160 280 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ERVMER34-1Q9H9K5 563 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 EXD2Q9NVH0 621 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 TEX10Q9NXF1 929 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 TMEFF2Q9UIK5 374 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 DAPP1Q9UN19 280 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 TPRKBQ9Y3C4 175 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 SAMHD1Q9Y3Z3 626 aaKnown RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ATG4BQ9Y4P1 393 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 SNX8Q9Y5X2 465 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 GPC6Q9Y625 555 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 CSNK1G3Q9Y6M4 447 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ENPP4Q9Y6X5 453 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ANKRD12Q6UB98 2062 aa10.03□□□□□ -0.8
CDCA3-201ENST00000229265 ARHGEF17Q96PE2 2063 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-201ENST00000229265 KNTC1P50748 2209 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SYNDIG1LA6NDD5 238 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 TTC36A6NLP5 189 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 TNFRSF11BO00300 401 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SYT5O00445 386 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 HMGN4O00479 90 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 HS6ST1O60243 411 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 MPZL2O60487 215 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 IFNW1P05000 195 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 JUNDP17535 347 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 POLR2CP19387 275 aaPredicted RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 CPN2P22792 545 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 IGFBP5P24593 272 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 ITPKBP27987 946 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 RRM2P31350 389 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SOAT1P35610 550 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 GRK6P43250 576 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 LIMS1P48059 325 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 DAPP51397 102 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 NCBP2P52298 156 aaKnown RBP eCLIP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 PDX1P52945 283 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 CRYBA2P53672 197 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 EPHA4P54764 986 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 NUP107P57740 925 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 HHEXQ03014 270 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 COX10Q12887 443 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 KCNAB2Q13303 367 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 C16orf72Q14CZ0 275 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 NDUFA9Q16795 377 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 ZSWIM7Q19AV6 140 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 DEFB133Q30KQ1 61 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 HES3Q5TGS1 186 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 GUSBP11Q6P575 273 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 LGI4Q8N135 537 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 ZNF786Q8N393 782 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 PARP8Q8N3A8 854 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 HORMAD2Q8N7B1 307 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 FAM46DQ8NEK8 389 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 OR8K5Q8NH50 307 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SPPL2AQ8TCT8 520 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 EXOSC8Q96B26 276 aaKnown RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 HRASLS5Q96KN8 279 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 SLC35G5Q96KT7 338 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 TRNT1Q96Q11 434 aaKnown RBP10.02□□□□□ -0.81
CDCA3-201ENST00000229265 CD180Q99467 661 aa10.02□□□□□ -0.81
CDCA3-201ENST00000229265 TSC22D3Q99576 134 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms