RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PCDHGB6Q9Y5F9 930 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 POLEQ07864 2286 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 NUP214P35658 2090 aaPredicted RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 A0A0G2JMM0 328 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 A0A1W2PPB8 328 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 A0A1W2PRS3 328 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 KIR3DP1A8MWS1 328 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 PEX1O43933 1283 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 SASH3O75995 380 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 GPX3P22352 226 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 RFC3P40938 356 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 MEOX1P50221 254 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 NCBP2P52298 156 aaKnown RBP eCLIP11.71□□□□□ -0.53
LSM5-201ENST00000223084 NNATQ16517 81 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 EIF2S3LQ2VIR3 472 aaKnown RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 ZNF791Q3KP31 576 aaPredicted RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 IL23RQ5VWK5 629 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 HLA-DQA1Q5Y7H0 255 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 OPN5Q6U736 354 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 GPALPP1Q8IXQ4 340 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 SAMD14Q8IZD0 417 aaPredicted RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 FAM9CQ8IZT9 166 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 FNDC5Q8NAU1 212 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 PSD4Q8NDX1 1056 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 OR7G2Q8NG99 324 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 SLC22A8Q8TCC7 542 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 ZNF675Q8TD23 568 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 NUDT8Q8WV74 236 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 NR4A3Q92570 626 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 CIDECQ96AQ7 238 aaPredicted RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 FRMD6Q96NE9 622 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 SH3GL2Q99962 352 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 SLX1AQ9BQ83 275 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 ITPAQ9BY32 194 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 NUF2Q9BZD4 464 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 TSPAN10Q9H1Z9 355 aaPredicted RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 GLIPR2Q9H4G4 154 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 REEP4Q9H6H4 257 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 TIMMDC1Q9NPL8 285 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 TAS2R7Q9NYW3 318 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 HAO1Q9UJM8 370 aa11.71□□□□□ -0.53
LSM5-201ENST00000223084 KLF13Q9Y2Y9 288 aaPredicted RBP11.71□□□□□ -0.53
LSM5-201ENST00000223084 HIVEP3Q5T1R4 2406 aa11.71□□□□□ -0.54
LSM5-201ENST00000223084 PINLYPA6NC86 204 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 ASPDHA6ND91 283 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 ANKUB1A6NFN9 424 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 SNNO75324 88 aaPredicted RBP11.7□□□□□ -0.54
LSM5-201ENST00000223084 CRYABP02511 175 aaKnown RBP11.7□□□□□ -0.54
LSM5-201ENST00000223084 CCL3P10147 92 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 KITP10721 976 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 EFNA1P20827 205 aaPredicted RBP11.7□□□□□ -0.54
LSM5-201ENST00000223084 MAPK1P28482 360 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 NTSP30990 170 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 MPIP34949 423 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 EMDP50402 254 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 TDGF1P3P51864 188 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 KCNK10P57789 538 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 RNFT1Q5M7Z0 435 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 FHL5Q5TD97 284 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 RTL4Q6ZR62 310 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 ZNF551Q7Z340 670 aaPredicted RBP11.7□□□□□ -0.54
LSM5-201ENST00000223084 PRR22Q8IZ63 422 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 OR5M3Q8NGP4 307 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 DNAJB8Q8NHS0 232 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 TP53INP1Q96A56 240 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 PPCDCQ96CD2 204 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 SPACA9Q96E40 222 aaPredicted RBP11.7□□□□□ -0.54
LSM5-201ENST00000223084 AMDHD1Q96NU7 426 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 NXF5Q9H1B4 397 aaKnown RBP11.7□□□□□ -0.54
LSM5-201ENST00000223084 MANSC1Q9H8J5 431 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 AKTIPQ9H8T0 292 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 VIPAS39Q9H9C1 493 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 THAP1Q9NVV9 213 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 SH3BP4Q9P0V3 963 aa11.7□□□□□ -0.54
LSM5-201ENST00000223084 MARCOQ9UEW3 520 aaPredicted RBP11.7□□□□□ -0.54
LSM5-201ENST00000223084 NPIPA5E9PKD4 350 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 SNUPNO95149 360 aaKnown RBP11.69□□□□□ -0.54
LSM5-201ENST00000223084 FBXO45P0C2W1 286 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 EDN3P14138 238 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 MC3RP41968 323 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 ASMTP46597 345 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 ALDH6A1Q02252 535 aaKnown RBP11.69□□□□□ -0.54
LSM5-201ENST00000223084 SRSF1Q07955 248 aaKnown RBP eCLIP11.69□□□□□ -0.54
LSM5-201ENST00000223084 PDE7AQ13946 482 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 PTGR1Q14914 329 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 ATG16L1Q676U5 607 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 TMEM107Q6UX40 140 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 TAGAPQ8N103 731 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 SLC15A4Q8N697 577 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 KRTCAP2Q8N6L1 136 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 GOLGA6L1Q8N7Z2 621 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 FAM98AQ8NCA5 519 aaKnown RBP11.69□□□□□ -0.54
LSM5-201ENST00000223084 ST6GALNAC3Q8NDV1 305 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 FAM13CQ8NE31 585 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 OR7A2PQ8NGA2 310 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 OR10G3Q8NGC4 313 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 ZNF75CPQ92670 426 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms