RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 OR1M1Q8NGA1 313 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 IMP4Q96G21 291 aaKnown RBP13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ARL5BQ96KC2 179 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 SLC2A13Q96QE2 648 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 MTERF1Q99551 399 aaKnown RBP13.91□□□□□ -0.18
PTPRA-201ENST00000216877 SPSB2Q99619 263 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ADGRE3Q9BY15 652 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ACPTQ9BZG2 426 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ZYG11BQ9C0D3 744 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 TINAGQ9UJW2 476 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 PGRMC2O15173 223 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 POP7O75817 140 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 RAB36O95755 333 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 POMCP01189 267 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 TRBC1P01850 177 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SRPRAP08240 638 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SDC1P18827 310 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 PITPNBP48739 271 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 PGDP52209 483 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 ARFIP1P53367 373 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SMAD2Q15796 467 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 PLA1AQ53H76 456 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 FAM26DQ5JW98 314 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SERPINA11Q86U17 422 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 FAM181AQ8N9Y4 354 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 OR52N1Q8NH53 320 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SCAMP5Q8TAC9 235 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 CA5BP1Q8WTZ4 195 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 POP5Q969H6 163 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 NUDT4Q9NZJ9 180 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 MBD2Q9UBB5 411 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 PURGQ9UJV8 347 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 MEIKINA0A087WXM9 373 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 TRBC2A0A5B9 178 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 C2orf81A6NN90 581 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SERPINA3P01011 423 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 TAF1AQ15573 450 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 MARCH8Q5T0T0 291 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 CYB5R2Q6BCY4 276 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SCN4BQ8IWT1 228 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 OR4K1Q8NGD4 311 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 ZC3H10Q96K80 434 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 MTG2Q9H4K7 406 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SLC6A20Q9NP91 592 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 ATXN7L1Q9ULK2 861 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 PRRC2BQ5JSZ5 2229 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 TRABD2BA6NFA1 517 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 F12P00748 615 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 RLN1P04808 185 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 FAM157BP0CG42 384 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 IL1RNP18510 177 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SLC11A2P49281 568 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 MVDP53602 400 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 LIMK1P53667 647 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SLC16A1P53985 500 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SELENOWP63302 87 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 GK2Q14410 553 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 C19orf48Q6RUI8 117 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 KCT2Q8NC54 265 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 HJURPQ8NCD3 748 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 BPIFCQ8NFQ6 507 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 NT5C3BQ969T7 300 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SGK3Q96BR1 496 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 ARMC5Q96C12 935 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 CPNE2Q96FN4 548 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 AHCYL2Q96HN2 611 aaKnown RBP13.9□□□□□ -0.18
PTPRA-201ENST00000216877 RASD1Q9Y272 281 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 SCN1AP35498 2009 aa13.9□□□□□ -0.18
PTPRA-201ENST00000216877 ABHD14A-ACY1A0A1B0GW23 586 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 LRIT2A6NDA9 550 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 KLHL18O94889 574 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 HTR3BO95264 441 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 ODC1P11926 461 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 HK1P19367 917 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 ITPKAP23677 461 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 BEX3Q00994 111 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 HMGN2P46Q86SG4 172 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 RTL3Q8N8U3 475 aaKnown RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 SCARB1Q8WTV0 552 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 GCDHQ92947 438 aaPredicted RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 WDR89Q96FK6 387 aaPredicted RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 C7orf50Q9BRJ6 194 aaKnown RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 CIPCQ9C0C6 399 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 BABAM2Q9NXR7 383 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 ARL15Q9NXU5 204 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 NDRG3Q9UGV2 375 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 SGK494L7N484 410 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 DVL2O14641 736 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 AHCYP23526 432 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 IGFBP6P24592 240 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms