RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 BMP4P12644 408 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 ARL9Q6T311 187 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 ZNF627Q7L945 461 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 LINGO2Q7L985 606 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 ADIPOR2Q86V24 386 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 OR9A2Q8NGT5 310 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 MUCL1Q96DR8 90 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 A0A1W2PPC4 97 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 PRLP01236 227 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 SLC9A3P48764 834 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 CXADRP78310 365 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 MALLQ13021 153 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 HTR4Q13639 388 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 OR4D1Q15615 310 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 LIN52Q52LA3 116 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 FCRLBQ6BAA4 426 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 TBC1D20Q96BZ9 403 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 WASH4PA8MWX3 477 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 TBX10O75333 385 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 ZNF43P17038 809 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 HK1P19367 917 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 ZNF846Q147U1 533 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 LEXMQ3ZCV2 418 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 C10orf62Q5T681 223 aaPredicted RBP13.04□□□□□ -0.32
SIX4-201ENST00000216513 LINC01465Q8N7H1 131 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 FAM86B1Q8N7N1 296 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 SLC37A2Q8TED4 501 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 WBP2Q969T9 261 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 RBM4BQ9BQ04 359 aaKnown RBP13.04□□□□□ -0.32
SIX4-201ENST00000216513 DPH2Q9BQC3 489 aaPredicted RBP13.04□□□□□ -0.32
SIX4-201ENST00000216513 RBM4Q9BWF3 364 aaKnown RBP13.04□□□□□ -0.32
SIX4-201ENST00000216513 IL20RAQ9UHF4 553 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 TLCD2A6NGC4 264 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 WDPCPO95876 746 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 CAPGP40121 348 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 RAB15P59190 212 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 TAS2R38P59533 333 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 PKDCCQ504Y2 493 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 SFT2D3Q587I9 215 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 KDELC1Q6UW63 502 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 ARHGAP12Q8IWW6 846 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 ROPN1LQ96C74 230 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 RBM24Q9BX46 236 aaKnown RBP13.04□□□□□ -0.32
SIX4-201ENST00000216513 NGBQ9NPG2 151 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 POLE4Q9NR33 117 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 ATE1O95260 518 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 RAB36O95755 333 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 PRLHRP49683 370 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 LRRC17Q8N6Y2 441 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 OR52P1PQ8NH57 321 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 TCF7L1Q9HCS4 588 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 TMEM184BQ9Y519 407 aaPredicted RBP13.04□□□□□ -0.32
SIX4-201ENST00000216513 FANCGO15287 622 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 DIO3P55073 304 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 LCTLQ6UWM7 567 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 TMEM184AQ6ZMB5 413 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 NEIL2Q969S2 332 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 SPEF1Q9Y4P9 236 aa13.04□□□□□ -0.32
SIX4-201ENST00000216513 ARPC2O15144 300 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 GCH1P30793 250 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 YTHDF3Q7Z739 585 aaKnown RBP13.03□□□□□ -0.32
SIX4-201ENST00000216513 TRIM63Q969Q1 353 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ZNF382Q96SR6 550 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 CUEDC1Q9NWM3 386 aaPredicted RBP13.03□□□□□ -0.32
SIX4-201ENST00000216513 SLC7A8Q9UHI5 535 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 NXT1Q9UKK6 140 aaKnown RBP13.03□□□□□ -0.32
SIX4-201ENST00000216513 FTCDNL1E5RQL4 147 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 GABRG2P18507 467 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ELK4P28324 431 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 PUDPQ08623 228 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 GRIK2Q13002 908 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 EFR3AQ14156 821 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 GRB7Q14451 532 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 LRIF1Q5T3J3 769 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 VWA5B2Q8N398 1253 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 GAL3ST3Q96A11 431 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 FBXL8Q96CD0 374 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 LRRC58Q96CX6 371 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 MYO7AQ13402 2215 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 DNAJB1P25685 340 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 PCLAFQ15004 111 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 TDRPQ86YL5 185 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 PIANPQ8IYJ0 282 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 OR10G2Q8NGC3 310 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 CCDC74BQ96LY2 380 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 FGF22Q9HCT0 170 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ZIM2Q9NZV7 527 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ACSL6Q9UKU0 697 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 A0A1W2PPW3 197 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 SRPX2O60687 465 aaPredicted RBP13.03□□□□□ -0.32
SIX4-201ENST00000216513 TNFRSF1BP20333 461 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 FDXRP22570 491 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 DNAJA1P31689 397 aaKnown RBP13.03□□□□□ -0.32
SIX4-201ENST00000216513 LAIR1Q6GTX8 287 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms