RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TAGAPQ8N103 731 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 NEIL3Q8TAT5 605 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 DIO2Q92813 273 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 NTMT1Q9BV86 223 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 MRPL1Q9BYD6 325 aaKnown RBP13.77□□□□□ -0.21
UPK3A-201ENST00000216211 CXorf21Q9HAI6 301 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 ZBTB26Q9HCK0 441 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 QPCTLQ9NXS2 382 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 XPR1Q9UBH6 696 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 KCNN3Q9UGI6 736 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 PCTPQ9UKL6 214 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 IKBKGQ9Y6K9 419 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 TRIM3O75382 744 aaPredicted RBP13.76□□□□□ -0.21
UPK3A-201ENST00000216211 KLK1P06870 262 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 RBP1P09455 135 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 GABRA1P14867 456 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 CHN1P15882 459 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 CREB1P16220 341 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 KRT15P19012 456 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 MAGEA12P43365 314 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 SERPINB9P50453 376 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 DLX5P56178 289 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 TRAF3Q13114 568 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 MYBPHQ13203 477 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 RIPPLY2Q5TAB7 128 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 LGSNQ5TDP6 509 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 CES4AQ5XG92 561 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 HLA-DQA1Q5Y7H0 255 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 FRG2Q64ET8 278 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 TMEM198Q66K66 360 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 WDR53Q7Z5U6 358 aaPredicted RBP13.76□□□□□ -0.21
UPK3A-201ENST00000216211 GALNT12Q8IXK2 581 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 ULK2Q8IYT8 1036 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 PRR22Q8IZ63 422 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 LIX1Q8N485 282 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 OR4K14Q8NGD5 310 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 TP53INP1Q96A56 240 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 ZNF597Q96LX8 424 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 FRG2BQ96QU4 278 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 OR10A5Q9H207 317 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 ACKR4Q9NPB9 350 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 B4GALT7Q9UBV7 327 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 NPFFR2Q9Y5X5 522 aa13.76□□□□□ -0.21
UPK3A-201ENST00000216211 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 STX16-NPEPL1H3BU86 382 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 STX16O14662 325 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 TP53I11O14683 189 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 SMIM24O75264 130 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 NT5EP21589 574 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 CNTFP26441 200 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 LSP1P33241 339 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 XKP51811 444 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 FUT7Q11130 342 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 IFT88Q13099 833 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 SNTB1Q13884 538 aaKnown RBP13.75□□□□□ -0.21
UPK3A-201ENST00000216211 RPS6KA2Q15349 733 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 SLC25A35Q3KQZ1 300 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 SGO1Q5FBB7 561 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 CCNYL2Q5T2Q4 361 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 FAM219BQ5XKK7 198 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 SEM1Q6ZVN7 128 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 MILR1Q7Z6M3 343 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 ZNF615Q8N8J6 731 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 SPPL2AQ8TCT8 520 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 NRGNQ92686 78 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 ISL2Q96A47 359 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 ADIPOR1Q96A54 375 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 MTBPQ96DY7 904 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 RILPQ96NA2 401 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 CCDC134Q9H6E4 229 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 FARSBQ9NSD9 589 aaKnown RBP13.75□□□□□ -0.21
UPK3A-201ENST00000216211 RYDENQ9NUL5 291 aaKnown RBP13.75□□□□□ -0.21
UPK3A-201ENST00000216211 INTS9Q9NV88 658 aaKnown RBP13.75□□□□□ -0.21
UPK3A-201ENST00000216211 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
UPK3A-201ENST00000216211 C2CD3Q4AC94 2353 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 ZNF469Q96JG9 3925 aaPredicted RBP13.74□□□□□ -0.21
UPK3A-201ENST00000216211 C15orf38-AP3S2A0A0A6YYH1 394 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 A0A1B0GTL3 188 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 A0A1W2PPM1 405 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 ANKRD33BA6NCL7 494 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 CAPN14A8MX76 684 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 KDM4EB2RXH2 506 aaPredicted RBP13.74□□□□□ -0.21
UPK3A-201ENST00000216211 TRAPPC6AO75865 159 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 ZWINTO95229 277 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 SNRPAP09012 282 aaKnown RBP13.74□□□□□ -0.21
UPK3A-201ENST00000216211 PORP16435 677 aaPredicted RBP13.74□□□□□ -0.21
UPK3A-201ENST00000216211 TSPAN8P19075 237 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 WNT3P56703 355 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 DUSP8Q13202 625 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 TBCELQ5QJ74 424 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 C6orf163Q5TEZ5 329 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 PAGE2Q7Z2X7 111 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 METTL4Q8N3J2 472 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 KCNK9Q9NPC2 374 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 AHSPQ9NZD4 102 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 ADAM29Q9UKF5 820 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 SLC12A4Q9UP95 1085 aa13.74□□□□□ -0.21
UPK3A-201ENST00000216211 DTX4Q9Y2E6 619 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms