RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CHMP24386 653 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 PRKCDQ05655 676 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 DUSP6Q16828 381 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 MFSD4BQ5TF39 518 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 LAX1Q8IWV1 398 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 DEPDC4Q8N2C3 294 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
CTNS-201ENST00000046640 OR52E1Q8NGJ3 308 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 OR5P2Q8WZ92 322 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 NEURL3Q96EH8 262 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 PDXPQ96GD0 296 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 SLC30A2Q9BRI3 323 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 TEX101Q9BY14 249 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 PRRG3Q9BZD7 231 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 OR51I1Q9H343 314 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 GLIPR2Q9H4G4 154 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 WBP11Q9Y2W2 641 aaKnown RBP12.41□□□□□ -0.42
CTNS-201ENST00000046640 N6AMT1Q9Y5N5 214 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 H0Y8X5 98 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 CSF2P04141 144 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 APODP05090 189 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 NR2F1P10589 423 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 PTNP21246 168 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 REEP5Q00765 189 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 PRDX1Q06830 199 aaKnown RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 SLAMF1Q13291 335 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 LASP1Q14847 261 aaKnown RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 ATAD3CQ5T2N8 411 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 ARMC4Q5T2S8 1044 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 SAXO2Q658L1 398 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 C18orf63Q68DL7 685 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 TUBA3EQ6PEY2 450 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 OR4E2Q8NGC2 313 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 TREX2Q9BQ50 279 aaPredicted RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 THSD1Q9NS62 852 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 ZNF221Q9UK13 617 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 UGT2A1Q9Y4X1 527 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 DNMT3AQ9Y6K1 912 aaPredicted RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 LRIT2A6NDA9 550 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 NTN1O95631 604 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 CEACAM5P06731 702 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 GABRB1P18505 474 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 AK4P27144 223 aaPredicted RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 SSTR4P31391 388 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 SNRPNP63162 240 aaKnown RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 DUSP2Q05923 314 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 BAK1Q16611 211 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 TCTN3Q6NUS6 607 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 IQCF1Q8N6M8 205 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 TRMT61AQ96FX7 289 aaKnown RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 C16orf58Q96GQ5 468 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 BBS4Q96RK4 519 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 RSPH9Q9H1X1 276 aaPredicted RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 PELI2Q9HAT8 420 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 ANKHQ9HCJ1 492 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 MRPS30Q9NP92 439 aaKnown RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 WASH6PQ9NQA3 447 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 PHPT1Q9NRX4 125 aaPredicted RBP12.4□□□□□ -0.42
CTNS-201ENST00000046640 PLSCR3Q9NRY6 295 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 SEMA3GQ9NS98 782 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 PLCXD1Q9NUJ7 323 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 CLN6Q9NWW5 311 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 ATG4BQ9Y4P1 393 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 A0A0C4DFX4 3053 aa12.4□□□□□ -0.42
CTNS-201ENST00000046640 H3BQ06 376 aaPredicted RBP12.4□□□□□ -0.43
CTNS-201ENST00000046640 CCRL2O00421 344 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 MRPS14O60783 128 aaKnown RBP12.4□□□□□ -0.43
CTNS-201ENST00000046640 EML2O95834 649 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 ERGP11308 486 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 RHCEP18577 417 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 TNNI3P19429 210 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 RAB28P51157 221 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 PCBP4P57723 403 aaKnown RBP12.4□□□□□ -0.43
CTNS-201ENST00000046640 AGAP6Q5VW22 663 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 VASH1Q7L8A9 365 aaPredicted RBP12.4□□□□□ -0.43
CTNS-201ENST00000046640 ZBED6CLQ96FA7 236 aaPredicted RBP12.4□□□□□ -0.43
CTNS-201ENST00000046640 AGAP4Q96P64 663 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 SLC17A9Q9BYT1 436 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 MVB12BQ9H7P6 319 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 GDE1Q9NZC3 331 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 TBC1D24Q9ULP9 559 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 ICKQ9UPZ9 632 aa12.4□□□□□ -0.43
CTNS-201ENST00000046640 SCN2AQ99250 2005 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 POM121BA6NF01 834 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 ISM1B1AKI9 464 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 FRS3O43559 492 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 CERS1P27544 350 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 ARHGAP19Q14CB8 494 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 SHHQ15465 462 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 LIPKQ5VXJ0 399 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 SHISA5Q8N114 240 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 CCL4L1Q8NHW4 92 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 BARHL1Q9BZE3 327 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
CTNS-201ENST00000046640 SMURF1Q9HCE7 757 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 TMCC3Q9ULS5 477 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 KCNE3Q9Y6H6 103 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 CLEC2LP0C7M8 214 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 CBLP22681 906 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 TRIM23P36406 574 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms