RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GALNT12Q8IXK2 581 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 KLHDC8AQ8IYD2 350 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 OR2L2Q8NH16 312 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ZFP90Q8TF47 636 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 GDF15Q99988 308 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 CNOT11Q9UKZ1 510 aaKnown RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 PCYT1BQ9Y5K3 369 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 TRIOO75962 3097 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 SOX3P41225 446 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 MLF2Q15773 248 aaPredicted RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 PYCR3Q53H96 274 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 CCNJQ5T5M9 372 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 GRHL2Q6ISB3 625 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 SLC30A6Q6NXT4 461 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 POMGNT2Q8NAT1 580 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 SNX33Q8WV41 574 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 FATE1Q969F0 183 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 LRR1Q96L50 414 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 DPYSL5Q9BPU6 564 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 A0A075B6Q4 140 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 ARNTLO00327 626 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 CRHBPP24387 322 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 BLKP51451 505 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 PFN3P60673 137 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 C22orf42Q6IC83 251 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 RTL4Q6ZR62 310 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 SHDQ96IW2 340 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 CDX2Q99626 313 aaPredicted RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 PIP5K1AQ99755 562 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 ASPNQ9BXN1 380 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 YTHDF1Q9BYJ9 559 aaKnown RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 DMRT3Q9NQL9 472 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 ZFR2Q9UPR6 939 aaKnown RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 A0A1B0GVC2 190 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 DAPL1A0PJW8 107 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 A6NIN4 97 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 PGRMC2O15173 223 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 HIST1H2ABP04908 130 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 IFI30P13284 250 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 CXCL12P48061 93 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 XKR7Q5GH72 579 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 HIST3H2AQ7L7L0 130 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 MFSD2AQ8NA29 543 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 OR4K5Q8NGD3 323 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 OR2I1PQ8NGU4 316 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 HIST1H2ACQ93077 130 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 PCBD2Q9H0N5 130 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 MRPL39Q9NYK5 338 aaKnown RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 PPIEQ9UNP9 301 aaKnown RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 GPR34Q9UPC5 381 aa11.42□□□□□ -0.58
CHPF2-201ENST00000035307 RPL36Q9Y3U8 105 aaKnown RBP11.42□□□□□ -0.58
CHPF2-201ENST00000035307 A0A1B0GVT2 93 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CENPXA8MT69 81 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 K7EQS6 105 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 KIAA0513O60268 411 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 ETHE1O95571 254 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CELA2BP08218 269 aaPredicted RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MASP1P48740 699 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CSTF1Q05048 431 aaKnown RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 HTR4Q13639 388 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 GTF2IRD2BQ6EKJ0 949 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 FRRS1Q6ZNA5 592 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 GTF2IRD2Q86UP8 949 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 PDZD3Q86UT5 571 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 LSRQ86X29 649 aaPredicted RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 GATAD2BQ8WXI9 593 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 RDH12Q96NR8 316 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 HDHD5Q9BXW7 423 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 NMNAT1Q9HAN9 279 aaPredicted RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 NEUROD4Q9HD90 331 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 IL1RAPQ9NPH3 570 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 PNO1Q9NRX1 252 aaKnown RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 TUBA8Q9NY65 449 aaPredicted RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MUTYHQ9UIF7 546 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 GRXCR2A6NFK2 248 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 J3QLW9 94 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CAPNS1P04632 268 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 RETP07949 1114 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 PSKH1P11801 424 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF19P17023 458 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 GABRG2P18507 467 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 UQCRC2P22695 453 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MYL9P24844 172 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 GRPRP30550 384 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 SSTR4P31391 388 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MC3RP41968 323 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 HNRNPA0Q13151 305 aaKnown RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 GAB1Q13480 694 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CYB561A3Q8NBI2 242 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 NUP43Q8NFH3 380 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 SLC25A36Q96CQ1 311 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MMABQ96EY8 250 aaPredicted RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CITED4Q96RK1 184 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 C2orf42Q9NWW7 574 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 STMN3Q9NZ72 180 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CARD8Q9Y2G2 431 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 LDB3O75112 727 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms