RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TCTN3Q6NUS6 607 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 CDC73Q6P1J9 531 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF773Q6PK81 442 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 TMEFF1Q8IYR6 380 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 CARFQ8N187 725 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 PARP8Q8N3A8 854 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC5A8Q8N695 610 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF675Q8TD23 568 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 KAT2AQ92830 837 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 ANKHQ9HCJ1 492 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 BLOC1S6Q9UL45 172 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 C19orf53Q9UNZ5 99 aaPredicted RBP13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 POFUT2Q9Y2G5 429 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 BLACEA4D250 179 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 TLCD2A6NGC4 264 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF860A6NHJ4 632 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 J3KTA2 159 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 STK25O00506 426 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 PLOD3O60568 738 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 OR6B1O95007 311 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 CCNB2O95067 398 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 YAP1P46937 504 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 CSNK1EP49674 416 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 C21orf59P57076 290 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 NDUFA9Q16795 377 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 FAM214AQ32MH5 1076 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 INAVAQ3KP66 663 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 CYP27C1Q4G0S4 372 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 GARNL3Q5VVW2 1013 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF770Q6IQ21 691 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 RBM44Q6ZP01 1051 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 HRASLS5Q96KN8 279 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 YIPF4Q9BSR8 244 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 PINK1Q9BXM7 581 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 PAPOLBQ9NRJ5 636 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 GMPPBQ9Y5P6 360 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 TMEM131Q92545 1883 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 FGF17O60258 216 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 OXSR1O95747 527 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 LGI1O95970 557 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 JUNBP17275 347 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 CBLP22681 906 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 TTKP33981 857 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 EMP3P54852 163 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 NUP107P57740 925 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 SHC2P98077 582 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 CDK5R2Q13319 367 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 FAM53BQ14153 422 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 MEP1AQ16819 746 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 DEFB133Q30KQ1 61 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ZCCHC12Q6PEW1 402 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 FAM111BQ6SJ93 734 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ALDH16A1Q8IZ83 802 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 DEFB123Q8N688 67 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 OR5T3Q8NGG3 340 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ADAMTS15Q8TE58 950 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ADAMTS18Q8TE60 1221 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 PHF10Q8WUB8 498 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ALPK1Q96QP1 1244 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 YIPF3Q9GZM5 350 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC38A1Q9H2H9 487 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 ENOPH1Q9UHY7 261 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 PLCL2Q9UPR0 1127 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC9A8Q9Y2E8 581 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 KCNE3Q9Y6H6 103 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 CEPT1Q9Y6K0 416 aa13.42□□□□□ -0.26
RTFDC1-201ENST00000023939 GOLGA4Q13439 2230 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 SEMA7AO75326 666 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 CPNE6O95741 557 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 DCNP07585 359 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 IL7RP16871 459 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 ESRRGP62508 458 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 RPP38P78345 283 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 ZBED5Q49AG3 693 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 GPAT3Q53EU6 434 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 BROXQ5VW32 411 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 OR4N5Q8IXE1 308 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 TMEM52Q8NDY8 209 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 OR4D11Q8NGI4 311 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 OR52J3Q8NH60 311 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 NR4A3Q92570 626 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 ANKRD9Q96BM1 317 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 CTHRC1Q96CG8 243 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC35A4Q96G79 324 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 ZDHHC12Q96GR4 267 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 TUBA1CQ9BQE3 449 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 FUZQ9BT04 418 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 NMNAT1Q9HAN9 279 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 UCKL1Q9NWZ5 548 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 TDRD6O60522 2096 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-201ENST00000023939 FITM1A5D6W6 292 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 SGK494L7N484 410 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC1A7O00341 560 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 PCDH17O14917 1159 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 CHST10O43529 356 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 ABCB7O75027 752 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms