RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZNF750Q32MQ0 723 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 PLK5Q496M5 336 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 LY6G5CQ5SRR4 150 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 LCN1P1Q5VSP4 162 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 ZNF730Q6ZMV8 503 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 ZNF547Q8IVP9 402 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 CLDN22Q8N7P3 220 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 C7orf57Q8NEG2 295 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 OR4F15Q8NGB8 312 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 OR5P2Q8WZ92 322 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 SMPDL3AQ92484 453 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 SNAPC3Q92966 411 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 WDR34Q96EX3 536 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 POLDIP3Q9BY77 421 aaKnown RBP13.25□□□□□ -0.29
USH1C-201ENST00000005226 ANKRA2Q9H9E1 313 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 GALNT9Q9HCQ5 603 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 CNIH4Q9P003 139 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 TAC3Q9UHF0 121 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 ASF1AQ9Y294 204 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 NR2F6P10588 404 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 IFI30P13284 250 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 ALAS2P22557 587 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 MAP2K3P46734 347 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 SLC6A11P48066 632 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 PRAMEF14Q5SWL7 426 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 PRAMEF13Q5VWM6 474 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 SLC39A11Q8N1S5 342 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 C19orf18Q8NEA5 215 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 OR8D4Q8NGM9 314 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 MTERF3Q96E29 417 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 TEFMQ96QE5 360 aaKnown RBP13.25□□□□□ -0.29
USH1C-201ENST00000005226 SLA2Q9H6Q3 261 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 ZSCAN32Q9NX65 697 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 CD8B2A6NJW9 211 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 H7BY64 318 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 MMP20O60882 483 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 SOD1P00441 154 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 LIMS3P0CW19 117 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 LIMS4P0CW20 117 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 CD8BP10966 210 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 SYN1P17600 705 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 SDHBP21912 280 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 BNC1Q01954 994 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 CHRNEQ04844 493 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 FAPQ12884 760 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 LRRC32Q14392 662 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 ZNF658BQ4V348 819 aaPredicted RBP13.24□□□□□ -0.29
USH1C-201ENST00000005226 TRIQKQ629K1 86 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 PARS2Q7L3T8 475 aaKnown RBP13.24□□□□□ -0.29
USH1C-201ENST00000005226 FAM20CQ8IXL6 584 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 CD99L2Q8TCZ2 262 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 UPRTQ96BW1 309 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 ZNF689Q96CS4 500 aaPredicted RBP13.24□□□□□ -0.29
USH1C-201ENST00000005226 ZNF558Q96NG5 402 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 PRAP1Q96NZ9 151 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 SAP130Q9H0E3 1048 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.24□□□□□ -0.29
USH1C-201ENST00000005226 SLC30A4O14863 429 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 HRO43593 1189 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 LILRB5O75023 590 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 LRG1P02750 347 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 BSGP35613 385 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 GNG2P59768 71 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 BTBD16Q32M84 506 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 ZNF791Q3KP31 576 aaPredicted RBP13.24□□□□□ -0.29
USH1C-201ENST00000005226 HSDL2Q6YN16 418 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 PRICKLE2Q7Z3G6 844 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
USH1C-201ENST00000005226 TBC1D19Q8N5T2 526 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 TMEM145Q8NBT3 493 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 DEDD2Q8WXF8 326 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 ZG16BQ96DA0 208 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 ART5Q96L15 291 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 MRGPRX3Q96LB0 322 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 DHRS1Q96LJ7 313 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 WACQ9BTA9 647 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 ZDHHC5Q9C0B5 715 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 IL36AQ9UHA7 158 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 ABT1Q9ULW3 272 aaKnown RBP13.24□□□□□ -0.29
USH1C-201ENST00000005226 ICKQ9UPZ9 632 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 NTNG1Q9Y2I2 539 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 WNT6Q9Y6F9 365 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 KCNE3Q9Y6H6 103 aa13.24□□□□□ -0.29
USH1C-201ENST00000005226 OBSL1O75147 1896 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 FAM240BA0A1B0GVZ2 78 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 A0A1W2PS29 197 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 WASH3PC4AMC7 463 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 DDX5P17844 614 aaKnown RBP13.23□□□□□ -0.29
USH1C-201ENST00000005226 MLLT3P42568 568 aaPredicted RBP13.23□□□□□ -0.29
USH1C-201ENST00000005226 KHDRBS2Q5VWX1 349 aaKnown RBP13.23□□□□□ -0.29
USH1C-201ENST00000005226 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 QSOX2Q6ZRP7 698 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 FGF11Q92914 225 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 IRF7Q92985 503 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 OTULINQ96BN8 352 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 RIPOR3Q96MK2 946 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 ZNF607Q96SK3 696 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 LHX9Q9NQ69 397 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms