RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Mrpl9Q99N94 265 aaKnown RBP10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ly6kQ9CWP4 154 aa10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Exosc7Q9D0M0 291 aaKnown RBP10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Prss52Q9D9M0 321 aa10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Spatc1lQ9D9W0 342 aa10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Fam13cQ9DBR2 601 aa10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ca7Q9ERQ8 264 aa10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 PfkpQ9WUA3 784 aaKnown RBP10.8□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sbf2E9PXF8 1872 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 A0A1W2P799 418 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr172E9Q8F6 309 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 S100a2J3QMC7 104 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 HpnO35453 436 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Art5P70352 309 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Pde7aP70453 456 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Fam98aQ3TJZ6 515 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Dcp1bQ3U564 578 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Epha1Q60750 977 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Lasp1Q61792 263 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Nr0b2Q62227 260 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sumf2Q8BPG6 308 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Slc26a9Q8BU91 790 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 AntxrlQ8BVM2 641 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mettl3Q8C3P7 580 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Trpv4Q9EPK8 871 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm6710A2ART0 554 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 BckdhaP50136 442 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Aqp2P56402 271 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Rps25P62852 125 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Q3KQP7 184 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Eri2Q5BKS4 688 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tas2r110Q7M712 333 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Crb2Q80YA8 1282 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Zfp763Q8BIC7 588 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sirt4Q8R216 333 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr669Q8VGU9 317 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Impa2Q91UZ5 290 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Trmt5Q9D0C4 501 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Erp27Q9D8U3 272 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Plscr3Q9JIZ9 296 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Polr2aP08775 1970 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tk1P04184 233 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Polr2lP62876 67 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr1469Q8VFW5 309 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gatad2bQ8VHR5 594 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Oas3Q8VI93 1138 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Katnbl1Q9CWJ3 299 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Glipr1l1Q9DAG6 236 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm29394H3BIW7 199 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Cd160O88875 185 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 B3gnt6Q3USF0 391 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Scgb1c1Q7M742 95 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gpr119Q7TQP3 335 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tctn1Q8BZ64 593 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Vmn1r81Q8R286 306 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tmem185bQ8R3R5 350 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr821Q8VG45 310 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 4930503E14RikQ9D583 177 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 NaaaQ9D7V9 362 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ebna1bp2Q9D903 306 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Alg5Q9DB25 324 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mrps15Q9DC71 258 aaKnown RBP10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sp6Q9ESX2 376 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Plekhb1Q9QYE9 243 aa10.79□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Slc37a4A0A1L1SUI3 450 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 FcmrA1KXC4 422 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm8973D3YX71 104 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 8030474K03RikE9Q4Y8 554 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Oaz2O08608 189 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 RrhO35214 337 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Rftn1Q6A0D4 554 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 CltbQ6IRU5 229 aaKnown RBP10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tgif2Q8C0Y1 237 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ubqln1Q8R317 582 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Krt88Q9CPR6 171 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Med11Q9D8C6 117 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tor3aQ9ER38 385 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sgk2Q9QZS5 367 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sac3d1A6H687 427 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Cldn34b1B1AZQ8 209 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm8857L7N291 182 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Cyp2j5O54749 501 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sp1O89090 784 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Folr1P35846 255 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Irf7P70434 457 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tmed3Q78IS1 221 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Bpifb2Q8C1E1 462 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 RfkQ8CFV9 155 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Klhl22Q99JN2 634 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tnfrsf12aQ9CR75 129 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Cldn34b2Q9D9N2 209 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Prl5a1Q9JII2 230 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Elf4Q9Z2U4 655 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm8334F7CD45 553 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Angpt1O08538 498 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Sox4Q06831 440 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ubxn2bQ0KL01 331 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tstd2Q3U269 495 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Cldn34b4Q3V0X2 211 aa10.78□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ap1s3Q7TN05 154 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms