RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ITIH1P19827 911 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 KDELR2P33947 212 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 HBA1P69905 142 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 PRR5P85299 388 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 HYAL2Q12891 473 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 MED21Q13503 144 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 ATP6AP1Q15904 470 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.186e-6■■■■□ 21.1
PHGDH-234ENST00000642041 PATL1Q86TB9 770 aaKnown RBP16.19■□□□□ 0.18
PHGDH-234ENST00000642041 PDSS2Q86YH6 399 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 SVOPLQ8N434 492 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 TMEM102Q8N9M5 508 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-234ENST00000642041 OR56A1Q8NGH5 318 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 FKBP10Q96AY3 582 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 NEURL3Q96EH8 262 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 PYURFQ96I23 114 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 RDH12Q96NR8 316 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 SPATA5L1Q9BVQ7 753 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 RPF2Q9H7B2 306 aaKnown RBP16.19■□□□□ 0.18
PHGDH-234ENST00000642041 BATF3Q9NR55 127 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 AGPAT4Q9NRZ5 378 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 ANGPT4Q9Y264 503 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 ASB4Q9Y574 426 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 TLCD2A6NGC4 264 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 DUXAA6NLW8 204 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 TOX3O15405 576 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 PROM1O43490 865 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 C6orf47O95873 294 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 GSNP06396 782 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 ITGA2P17301 1181 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 ALDH9A1P49189 494 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 MAZP56270 477 aaKnown RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 PLIN5Q00G26 463 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 TP53BP2Q13625 1128 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 FAM53BQ14153 422 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 GCNT6Q5T4J0 391 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 PRAMEF8Q5VWM4 474 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 PRAMEF7Q5VXH5 474 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 FAM219BQ5XKK7 198 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 ZNF787Q6DD87 383 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 FCRL6Q6DN72 434 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 OR52E8Q6IFG1 317 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 PPP4R4Q6NUP7 873 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 SLC48A1Q6P1K1 146 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 IZUMO2Q6UXV1 221 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 ZBTB49Q6ZSB9 765 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 CCDC80Q76M96 950 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 EIF3MQ7L2H7 374 aaKnown RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 C19orf47Q8N9M1 422 aaKnown RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 UTP15Q8TED0 518 aaKnown RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 NRG4Q8WWG1 115 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 TANKQ92844 425 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 AHCYL2Q96HN2 611 aaKnown RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 CHID1Q9BWS9 393 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 B3GNT4Q9C0J1 378 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 TRIM45Q9H8W5 580 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 LHX9Q9NQ69 397 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 CALML5Q9NZT1 146 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 DNAJB9Q9UBS3 223 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 UTS2RQ9UKP6 389 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 MRPS33Q9Y291 106 aaKnown RBP16.18■□□□□ 0.18
PHGDH-234ENST00000642041 ZFHX3Q15911 3703 aa16.18■□□□□ 0.18
PHGDH-234ENST00000642041 OTOGQ6ZRI0 2925 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 MYO1GB0I1T2 1018 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 C9orf172C9J069 976 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 CLOCKO15516 846 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 TMPRSS11DO60235 418 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 KLHL18O94889 574 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 NR2F6P10588 404 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 UQCRBP14927 111 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 GPC1P35052 558 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 ETV5P41161 510 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 CDKN2CP42773 168 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 BTN3A2P78410 334 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 CCL7P80098 99 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 NR1D2Q14995 579 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 FAM214AQ32MH5 1076 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 SPDYE7PQ495Y7 208 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 YOD1Q5VVQ6 348 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-234ENST00000642041 IRGCQ6NXR0 463 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 DNAJC14Q6Y2X3 702 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-234ENST00000642041 ZNF438Q7Z4V0 828 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 VN1R4Q7Z5H5 301 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 ZC3H7AQ8IWR0 971 aaKnown RBP16.17■□□□□ 0.18
PHGDH-234ENST00000642041 CLECL1Q8IZS7 167 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 NRBF2Q96F24 287 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 TEFMQ96QE5 360 aaKnown RBP16.17■□□□□ 0.18
PHGDH-234ENST00000642041 PKP2Q99959 881 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 PDE7BQ9NP56 450 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 PLCL2Q9UPR0 1127 aa16.17■□□□□ 0.18
PHGDH-234ENST00000642041 A0A0J9YVX5 310 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 A0A1W2PQM1 296 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 H0YGG7 62 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 DENRO43583 198 aaKnown RBP16.16■□□□□ 0.18
PHGDH-234ENST00000642041 DUX1O43812 170 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 ZBTB11O95625 1053 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-234ENST00000642041 GBAP04062 536 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 MSL3P1P0C860 447 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 CPN2P22792 545 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms