RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 HCN3Q9P1Z3 774 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 OTOFQ9HC10 1997 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 OR5K3A6NET4 321 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 GAPDHSO14556 408 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-227ENST00000640957 SGTAO43765 313 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 PIP5K1CO60331 668 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 ACSL4O60488 711 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 IGHA2P01877 340 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 BDKRB1P46663 353 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 MAPKAPK2P49137 400 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 CLCNKAP51800 687 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 MVDP53602 400 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 ARF5P84085 180 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 MLIPQ5VWP3 458 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 WDFY2Q96P53 400 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 GPA33Q99795 319 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 MARVELD1Q9BSK0 173 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 TMEM202A6NGA9 273 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 FAM183AA6NL82 134 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ZNF623O75123 536 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 STATHP02808 62 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ALPPL2P10696 532 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ITGALP20701 1170 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 MAPK1P28482 360 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ERVFC1P60507 584 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 MELKQ14680 651 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 LUZP2Q86TE4 346 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 GPR135Q8IZ08 494 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ZNF527Q8NB42 609 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 OR6M1Q8NGM8 313 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 RBPMSQ93062 196 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 MYO19Q96H55 970 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 MSLNLQ96KJ4 702 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 COQ10AQ96MF6 247 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 PKMYT1Q99640 499 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 THAP7Q9BT49 309 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 PLA2G12AQ9BZM1 189 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 TMEM245Q9H330 911 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 METTL17Q9H7H0 456 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 BRD7Q9NPI1 651 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SLC35C2Q9NQQ7 365 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SLCO1C1Q9NYB5 712 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 TEX13CA0A0J9YWL9 993 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 GLYATL1P3A0A0U1RQE8 302 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SMAD9O15198 467 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 TPPPO94811 219 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 HOXD4P09016 255 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 NR2F6P10588 404 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ATF6P18850 670 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 PREPP48147 710 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SMAD3P84022 425 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 VEZF1Q14119 521 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 GRK1Q15835 563 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ATRAIDQ6UW56 229 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ZNF782Q6ZMW2 699 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 NR2C2APQ86WQ0 139 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 GPR26Q8NDV2 337 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 OR4D11Q8NGI4 311 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ASB12Q8WXK4 309 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 TTC9Q92623 222 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ATF6BQ99941 703 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ABCG4Q9H172 646 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 IMP3Q9NV31 184 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 WDR90Q96KV7 1748 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 A0A0G2JN53 185 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SCAMP2O15127 329 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 IL1AP01583 271 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 KLKB1P03952 638 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 IDSP22304 550 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 STOMP27105 288 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 EVX1P49640 407 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 ACLYP53396 1101 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 CAP1Q01518 475 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 DCST1Q5T197 706 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 LYPD4Q6UWN0 246 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 KLBQ86Z14 1044 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 RNFT2Q96EX2 444 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 QRSL1Q9H0R6 528 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 KCNK12Q9HB15 430 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SLC25A19Q9HC21 320 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 SEMA3GQ9NS98 782 aa13.03□□□□□ -0.32
SCARB2-227ENST00000640957 CNOT2Q9NZN8 540 aaKnown RBP13.03□□□□□ -0.32
SCARB2-227ENST00000640957 GREB1Q4ZG55 1949 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 A0A1W2PPL8 197 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 RPS10-NUDT3A0A1W2PQS6 291 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 LINC01387J3KSC0 135 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 PPM1BO75688 479 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 APOC3P02656 99 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 FAM157BP0CG42 384 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 HNF1BP35680 557 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 XCR1P46094 333 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms