RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 RNF4P78317 190 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 PHC1P78364 1004 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 CRB2Q5IJ48 1285 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 TCTN3Q6NUS6 607 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 TMEM107Q6UX40 140 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 HSDL2Q6YN16 418 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 CAMKMTQ7Z624 323 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 RPS19BP1Q86WX3 136 aaKnown RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF615Q8N8J6 731 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 OR52R1Q8NGF1 315 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 C9orf43Q8TAL5 461 aaPredicted RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 STON2Q8WXE9 905 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 TESCQ96BS2 214 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 ZBED6CLQ96FA7 236 aaPredicted RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 MAGED4Q96JG8 741 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 BHLHE41Q9C0J9 482 aaPredicted RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 FAM107BQ9H098 131 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 ADNPQ9H2P0 1102 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 SDR39U1Q9NRG7 319 aaPredicted RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 ATAD3AQ9NVI7 634 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 KLHL14Q9P2G3 628 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 BCAP29Q9UHQ4 241 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 MAPRE3Q9UPY8 281 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 DTX4Q9Y2E6 619 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 COPG1Q9Y678 874 aaKnown RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 ZZEF1O43149 2961 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 PKD1L2Q7Z442 2459 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 WWP2O00308 870 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 SCN2BO60939 215 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 SLC22A3O75751 556 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ZFAND5O76080 213 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 C6orf47O95873 294 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 F10P00742 488 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 NCF2P19878 526 aaPredicted RBP12.25□□□□□ -0.45
GTF3A-209ENST00000640289 GPX3P22352 226 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 GPC1P35052 558 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 KIR3DL1P43629 444 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 DGKQP52824 942 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 STX1BP61266 288 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 EBPQ15125 230 aaKnown RBP12.25□□□□□ -0.45
GTF3A-209ENST00000640289 FAM174BQ3ZCQ3 159 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ACER2Q5QJU3 275 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 FHL5Q5TD97 284 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ISLR2Q6UXK2 745 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ANKRD46Q86W74 232 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 CLECL1Q8IZS7 167 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 BEST3Q8N1M1 668 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 MIER2Q8N344 545 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 OR7G1Q8NGA0 311 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 OR8K3Q8NH51 312 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 C16orf52Q8NHV5 167 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ZFP28Q8NHY6 868 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 C10orf82Q8WW14 230 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ELP4Q96EB1 424 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 GAL3ST4Q96RP7 486 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 UBL7Q96S82 380 aaPredicted RBP12.25□□□□□ -0.45
GTF3A-209ENST00000640289 RABEP2Q9H5N1 569 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ACSS1Q9NUB1 689 aaPredicted RBP12.25□□□□□ -0.45
GTF3A-209ENST00000640289 PLA2G3Q9NZ20 509 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 STMN3Q9NZ72 180 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 ZIM2Q9NZV7 527 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 TUBD1Q9UJT1 453 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 LOC400499M0QZD8 3231 aa12.25□□□□□ -0.45
GTF3A-209ENST00000640289 GMNCA6NCL1 334 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 UPK1AO00322 258 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 PLOD2O00469 737 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 PLOD3O60568 738 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF354AO60765 605 aaPredicted RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 WDPCPO95876 746 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ALPPP05187 535 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ABCB1P08183 1280 aaPredicted RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 CD1EP15812 388 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 DDX5P17844 614 aaKnown RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 DRD4P21917 467 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 CD97P48960 835 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 MRPL19P49406 292 aaKnown RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 EMDP50402 254 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 MLF1P58340 268 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 SRSF11Q05519 484 aaKnown RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 MFAP5Q13361 173 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 MEP1AQ16819 746 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 LACTB2Q53H82 288 aaPredicted RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ABHD17BQ5VST6 288 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ASB18Q6ZVZ8 466 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 SLC29A4Q7RTT9 530 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 OR8J2Q8NGG1 315 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF354BQ96LW1 612 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 BBC3Q96PG8 261 aaPredicted RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ZBTB18Q99592 522 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ELAC2Q9BQ52 826 aaKnown RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ITPAQ9BY32 194 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 WWTR1Q9GZV5 400 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF385DQ9H6B1 395 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 EPS8L2Q9H6S3 715 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 CXorf36Q9H7Y0 433 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 SIRT3Q9NTG7 399 aaPredicted RBP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.24□□□□□ -0.45
GTF3A-209ENST00000640289 ANKRD10Q9NXR5 420 aa12.24□□□□□ -0.45
GTF3A-209ENST00000640289 TEKT2Q9UIF3 430 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms