RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 RHOJQ9H4E5 214 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 LDAHQ9H6V9 325 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 IFT22Q9H7X7 185 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 LIN28AQ9H9Z2 209 aaKnown RBP5.05□□□□□ -1.6
PDE4D-229ENST00000638939 ZFP64Q9NPA5 681 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 PRDM7Q9NQW5 492 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 DNAJC11Q9NVH1 559 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.05□□□□□ -1.6
PDE4D-229ENST00000638939 NSMCE4AQ9NXX6 385 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 CTNNAL1Q9UBT7 734 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 ZNF629Q9UEG4 869 aaPredicted RBP5.05□□□□□ -1.6
PDE4D-229ENST00000638939 MTRF1LQ9UGC7 380 aaKnown RBP5.05□□□□□ -1.6
PDE4D-229ENST00000638939 ACAD8Q9UKU7 415 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 PLEKHA6Q9Y2H5 1048 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 EMC9Q9Y3B6 208 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 PSAT1Q9Y617 370 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 CHCHD2Q9Y6H1 151 aaPredicted RBP5.05□□□□□ -1.6
PDE4D-229ENST00000638939 TEX264Q9Y6I9 313 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 IKBKGQ9Y6K9 419 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.05□□□□□ -1.6
PDE4D-229ENST00000638939 CR1P17927 2039 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 ROS1P08922 2347 aa5.05□□□□□ -1.6
PDE4D-229ENST00000638939 SONP18583 2426 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MBD3L4A6NDZ8 208 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MBD3L3A6NE82 208 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MBD3L5A6NJ08 208 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 OR6C76A6NM76 312 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 AHRRA9YTQ3 701 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CLGNO14967 610 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 FGF17O60258 216 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 PRAMEF4O60810 478 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 DNAJA2O60884 412 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 LDB3O75112 727 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 UBOX5O94941 541 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ETHE1O95571 254 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 EPPINO95925 133 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 EPORP19235 508 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CD22P20273 847 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 BMP5P22003 454 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 TACR1P25103 407 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ATP5A1P25705 553 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 IVDP26440 423 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 UQCRC1P31930 480 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ELK3P41970 407 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CASP2P42575 452 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 GDF5P43026 501 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 SSR2P43308 183 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 DGKQP52824 942 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ARFIP1P53367 373 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 KCNJ2P63252 427 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 POU4F1Q01851 419 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CRYZQ08257 329 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MGAT5Q09328 741 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ASPHQ12797 758 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 EBPQ15125 230 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 SF3B4Q15427 424 aaKnown RBP eCLIP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 NTRK2Q16620 822 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 DEFB113Q30KQ7 82 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 NHSL2Q5HYW2 709 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 PRAMEF9Q5VWM5 478 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 SLC22A10Q63ZE4 541 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 NSUN5P2Q63ZY6 315 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 SYDE1Q6ZW31 735 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 LRRC70Q7Z2Q7 622 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 UBE3DQ7Z6J8 389 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 GAS2L3Q86XJ1 694 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 WDR75Q8IWA0 830 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 PM20D2Q8IYS1 436 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ST13P4Q8IZP2 240 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ACOT4Q8N9L9 421 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 OR10G3Q8NGC4 313 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 GOT1L1Q8NHS2 421 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MBD3L2Q8NHZ7 208 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 UBTD2Q8WUN7 234 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ANKRD49Q8WVL7 239 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 UBE2E3Q969T4 207 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ANKRD9Q96BM1 317 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CFAP36Q96G28 342 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CAPZA3Q96KX2 299 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 RUNDC3BQ96NL0 473 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 DGAT2Q96PD7 388 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 FANCD2OSQ96PS1 177 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 OSBPL9Q96SU4 736 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MAPKAP1Q9BPZ7 522 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 DOHHQ9BU89 302 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CNPPD1Q9BV87 410 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 WWTR1Q9GZV5 400 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MRPL18Q9H0U6 180 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 SLC6A15Q9H2J7 730 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 UBQLN3Q9H347 655 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 LIME1Q9H400 295 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 EXO5Q9H790 373 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 PROK2Q9HC23 129 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 SEMA4BQ9NPR2 832 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MS4A12Q9NXJ0 267 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 MOCS1Q9NZB8 636 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 WWOXQ9NZC7 414 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 GMPR2Q9P2T1 348 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 PHF11Q9UIL8 331 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms