RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TSSK6Q9BXA6 273 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 LATS2Q9NRM7 1088 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 MYEF2Q9P2K5 600 aaKnown RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SEC14L3Q9UDX4 400 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 TESQ9UGI8 421 aaKnown RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SPATA2Q9UM82 520 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 PPT2Q9UMR5 302 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 A0A0G2JPF8 293 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SERTM1A2A2V5 107 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ANXA2P2A6NMY6 339 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 HMSDA8MTL9 139 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 MAGEB17A8MXT2 336 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 HNRNPCL3B7ZW38 293 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 LANCL1O43813 399 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 EIF3GO75821 320 aaKnown RBP eCLIP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 RGS11O94810 467 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 HTR3BO95264 441 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ADAP00813 363 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 HNRNPCL4P0DMR1 293 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 GABRA1P14867 456 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SPI1P17947 270 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ELK1P19419 428 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 KIR3DL1P43629 444 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 RABGGTBP53611 331 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 RAP2BP61225 183 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 STX4Q12846 297 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 HLXQ14774 488 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 GRIN2CQ14957 1233 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 UBXN2BQ14CS0 331 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 CCDC85BQ15834 202 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 HECTD3Q5T447 861 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SLC25A25Q6KCM7 469 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ANKRD46Q86W74 232 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 TMEM17Q86X19 198 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 TMEM86AQ8N2M4 240 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ARIH2OSQ8N7S6 290 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 FAM71CQ8NEG0 241 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 OR9Q2Q8NGE9 314 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 COQ8AQ8NI60 647 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 EEF1AKMT1Q8WVE0 214 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 C11orf24Q96F05 449 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SMARCD1Q96GM5 515 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 DDOQ99489 341 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SLC25A32Q9H2D1 315 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 CDCP1Q9H5V8 836 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 METTL17Q9H7H0 456 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 CSNK1G1Q9HCP0 422 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 DNAJC11Q9NVH1 559 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ERVK-19Q9WJR5 959 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ARL5AQ9Y689 179 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SCN8AQ9UQD0 1980 aa11.4□□□□□ -0.59
CAPN3-221ENST00000638141 SSNA1O43805 119 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 GALR3O60755 368 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SC5DO75845 299 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 RLN2P04090 185 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 S100A9P06702 114 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 TFPIP10646 304 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 INSRRP14616 1297 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF3P17036 446 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 NFYAP23511 347 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 S100A11P31949 105 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 GJA5P36382 358 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 LHX1P48742 406 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 VEGFCP49767 419 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 NR0B1P51843 470 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 MAZP56270 477 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 KIAA1024LP59773 190 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 CDC42EP1Q00587 391 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 FABP5Q01469 135 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 DSC1Q08554 894 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 MADCAM1Q13477 382 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF124Q15973 351 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SLC36A2Q495M3 483 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF770Q6IQ21 691 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 PYHIN1Q6K0P9 492 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 GPRIN1Q7Z2K8 1008 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 OAFQ86UD1 273 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 GPR65Q8IYL9 337 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 STK40Q8N2I9 435 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 GPR26Q8NDV2 337 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 OR13C4Q8NGS5 318 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 NANPQ8TBE9 248 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 GLYATL2Q8WU03 294 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 CNOT9Q92600 299 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 EDEM1Q92611 657 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 LPPQ93052 612 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 CMTM7Q96FZ5 175 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 FCRL2Q96LA5 508 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 MNTQ99583 582 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 TCEAL7Q9BRU2 100 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 CINPQ9BW66 212 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 APOL5Q9BWW9 433 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SORBS1Q9BX66 1292 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 CACNG6Q9BXT2 260 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 OSGEPL1Q9H4B0 414 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 FGF20Q9NP95 211 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SLAMF7Q9NQ25 335 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 ACER3Q9NUN7 267 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms