RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 RGS1Q08116 209 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 PIN1Q13526 163 aaPredicted RBP20.27■□□□□ 0.84
CLN6-224ENST00000638076 ANKDD1AQ495B1 522 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 FBXO42Q6P3S6 717 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 OR9A2Q8NGT5 310 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 FLVCR1-AS1Q8TAF5 88 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 BORCS5Q969J3 196 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 BCL2L10Q9HD36 194 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 NECTIN3Q9NQS3 549 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 LYARQ9NX58 379 aaKnown RBP20.27■□□□□ 0.84
CLN6-224ENST00000638076 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.27■□□□□ 0.842e-6■■■□□ 14.6
CLN6-224ENST00000638076 DSPPQ9NZW4 1301 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 FAAHO00519 579 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 TNFRSF10CO14798 259 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 ALDH4A1P30038 563 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 MC3RP41968 323 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 VBP1P61758 197 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 SNRPNP63162 240 aaKnown RBP20.26■□□□□ 0.83
CLN6-224ENST00000638076 PRR5P85299 388 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 ALG11Q2TAA5 492 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 NDNFQ8TB73 568 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 MOAP1Q96BY2 351 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 ZNF681Q96N22 645 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 OR2A14Q96R47 310 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 UCK2Q9BZX2 261 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 ANKRA2Q9H9E1 313 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 MS4A12Q9NXJ0 267 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 A4GNTQ9UNA3 340 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 KCNE3Q9Y6H6 103 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 ZNF780BQ9Y6R6 833 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 OXSR1O95747 527 aaPredicted RBP20.26■□□□□ 0.83
CLN6-224ENST00000638076 CNR2P34972 360 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 MAGEA8P43361 318 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 KIR2DS3Q14952 304 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 GPAT3Q53EU6 434 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 NRROSQ86YC3 692 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 FCGR1BQ92637 280 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 C8orf33Q9H7E9 229 aaPredicted RBP20.26■□□□□ 0.83
CLN6-224ENST00000638076 REV1Q9UBZ9 1251 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 CD207Q9UJ71 328 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 MGAT4BQ9UQ53 548 aa20.26■□□□□ 0.83
CLN6-224ENST00000638076 EMC8O43402 210 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 UGT2B17O75795 530 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 STSP08842 583 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 NR2F6P10588 404 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 CD36P16671 472 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 TGFBR2P37173 567 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 GNA13Q14344 377 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 CEBPEQ15744 281 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 TBCEQ15813 527 aaPredicted RBP20.25■□□□□ 0.83
CLN6-224ENST00000638076 EOGTQ5NDL2 527 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 SMRP1Q8NCR6 262 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 NUP43Q8NFH3 380 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 OR10G6Q8NH81 332 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 SLC7A13Q8TCU3 470 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 SPATA5L1Q9BVQ7 753 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 ITPAQ9BY32 194 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 EQTNQ9NQ60 294 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 hCG_2014768A0A024R1R8 64 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 EPPINO95925 133 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 SLC35G6P0C7Q6 338 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 OSMP13725 252 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 GABRG2P18507 467 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 POLR2CP19387 275 aaPredicted RBP20.25■□□□□ 0.83
CLN6-224ENST00000638076 AKT2P31751 481 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 OCA2Q04671 838 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 STX19Q8N4C7 294 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 NT5CQ8TCD5 201 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 MIPOL1Q8TD10 442 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 ELP4Q96EB1 424 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 NECTIN4Q96NY8 510 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 TRPV5Q9NQA5 729 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 SLC9A8Q9Y2E8 581 aa20.25■□□□□ 0.83
CLN6-224ENST00000638076 SH3PXD2BA1X283 911 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 GSAPA4D1B5 854 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 M0R3G1 203 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 SOX14O95416 240 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 UGT2B7P16662 529 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 C21orf59P57076 290 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 SMIM11AP58511 58 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 GPR18Q14330 331 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 SYT16Q17RD7 645 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 Q6ZSR6 202 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 PTCHD4Q6ZW05 846 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 SLCO6A1Q86UG4 719 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 SLC15A4Q8N697 577 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 ZCCHC10Q8TBK6 192 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 KAT2AQ92830 837 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 OR7D2Q96RA2 312 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 FUZQ9BT04 418 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 BTBD2Q9BX70 525 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 QRSL1Q9H0R6 528 aaKnown RBP20.24■□□□□ 0.83
CLN6-224ENST00000638076 C3orf14Q9HBI5 128 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 C11orf16Q9NQ32 467 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 TBC1D23Q9NUY8 699 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 TRNAU1APQ9NX07 287 aaKnown RBP20.24■□□□□ 0.83
CLN6-224ENST00000638076 A0A0G2JPF8 293 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 HNRNPCL2B2RXH8 293 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 HNRNPCL3B7ZW38 293 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 TPST2O60704 377 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms