RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 FAM111BQ6SJ93 734 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 CEACAM20Q6UY09 585 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 QSOX2Q6ZRP7 698 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 OVCH1Q7RTY7 1134 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 ZC3H7AQ8IWR0 971 aaKnown RBP11.02□□□□□ -0.65
CLN6-223ENST00000637823 OR2L13Q8N349 312 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 HORMAD2Q8N7B1 307 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 ENDOVQ8N8Q3 282 aaKnown RBP11.02□□□□□ -0.65
CLN6-223ENST00000637823 OR7G2Q8NG99 324 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 FIG4Q92562 907 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 PPWD1Q96BP3 646 aaKnown RBP11.02□□□□□ -0.65
CLN6-223ENST00000637823 CTHRC1Q96CG8 243 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 LIN37Q96GY3 246 aaPredicted RBP11.02□□□□□ -0.65
CLN6-223ENST00000637823 ZNF578Q96N58 590 aaPredicted RBP11.02□□□□□ -0.65
CLN6-223ENST00000637823 LRFN5Q96NI6 719 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 PTCHD1Q96NR3 888 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 DGAT2Q96PD7 388 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 DEPDC7Q96QD5 511 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 ZPBPQ9BS86 351 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 RBCK1Q9BYM8 510 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 CXorf21Q9HAI6 301 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 RNPEPL1Q9HAU8 725 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 NECTIN3Q9NQS3 549 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 TOR4AQ9NXH8 423 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 CLDN16Q9Y5I7 305 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 KNTC1P50748 2209 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 NINQ8N4C6 2090 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 IGLV3-12A0A075B6K2 115 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 TCRBV5S2A0A599 114 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 TGFBR3LH3BV60 316 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 UPK1AO00322 258 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 HMGN4O00479 90 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 CSO75390 466 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 JRKO75564 520 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 CDC123O75794 336 aaPredicted RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 HMGN2P05204 90 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 GPIP06744 558 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 NUDT7P0C024 238 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 ARAFP10398 606 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 MAOAP21397 527 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 AGXTP21549 392 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 SLC7A1P30825 629 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 KHKP50053 298 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 RAB15P59190 212 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 MRPS22P82650 360 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 MRPS35P82673 323 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 RHAGQ02094 409 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 EEF1A2Q05639 463 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 RCN1Q15293 331 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 TRMT12Q53H54 448 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 VWA2Q5GFL6 755 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 DCAF12Q5T6F0 453 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 INTS11Q5TA45 600 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 IRAK1BP1Q5VVH5 260 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 ZNF385CQ66K41 422 aaPredicted RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 TNFAIP8L2Q6P589 184 aaPredicted RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 ZCCHC12Q6PEW1 402 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 COX15Q7KZN9 410 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 RAB11FIP2Q7L804 512 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 SZRD1Q7Z422 152 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 EID3Q8N140 333 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 METTL25Q8N6Q8 603 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 PLPP5Q8NEB5 264 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 NETO1Q8TDF5 533 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 PYDC1Q8WXC3 89 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 RIT1Q92963 219 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 NCLNQ969V3 563 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 FAM162AQ96A26 154 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 MS4A4EQ96PG1 132 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 CTRCQ99895 268 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 ACTRT3Q9BYD9 372 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 OR51I1Q9H343 314 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 A4GALTQ9NPC4 353 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 SLC22A11Q9NSA0 550 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 DCAF13Q9NV06 445 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 OLAHQ9NV23 265 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 DDX18Q9NVP1 670 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 MAT2BQ9NZL9 334 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 STX18Q9P2W9 335 aaKnown RBP11.01□□□□□ -0.65
CLN6-223ENST00000637823 ZNF639Q9UID6 485 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 ZNF451Q9Y4E5 1061 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 LOXL2Q9Y4K0 774 aa11.01□□□□□ -0.65
CLN6-223ENST00000637823 GIMAP1-GIMAP5A0A087WTJ2 511 aa11□□□□□ -0.65
CLN6-223ENST00000637823 CCDC187A0A096LP49 1063 aa11□□□□□ -0.65
CLN6-223ENST00000637823 IGKV3D-11A0A0A0MRZ8 115 aa11□□□□□ -0.65
CLN6-223ENST00000637823 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11□□□□□ -0.65
CLN6-223ENST00000637823 TMEM247A6NEH6 219 aa11□□□□□ -0.65
CLN6-223ENST00000637823 OR2W5A6NFC9 320 aa11□□□□□ -0.65
CLN6-223ENST00000637823 DUXAA6NLW8 204 aa11□□□□□ -0.65
CLN6-223ENST00000637823 H0Y3Z8 333 aa11□□□□□ -0.65
CLN6-223ENST00000637823 MEN1O00255 615 aa11□□□□□ -0.65
CLN6-223ENST00000637823 ASNA1O43681 348 aa11□□□□□ -0.65
CLN6-223ENST00000637823 DKK1O94907 266 aa11□□□□□ -0.65
CLN6-223ENST00000637823 SOX30O94993 753 aa11□□□□□ -0.65
CLN6-223ENST00000637823 AGR2O95994 175 aa11□□□□□ -0.65
CLN6-223ENST00000637823 ALBP02768 609 aa11□□□□□ -0.65
CLN6-223ENST00000637823 IFNA16P05015 189 aa11□□□□□ -0.65
CLN6-223ENST00000637823 KLK3P07288 261 aaPredicted RBP11□□□□□ -0.65
CLN6-223ENST00000637823 TFPTP0C1Z6 253 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms