RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 FUT8Q9BYC5 575 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 ZBTB26Q9HCK0 441 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 AHSPQ9NZD4 102 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 PCTPQ9UKL6 214 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 TMCO1Q9UM00 188 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 MED13LQ71F56 2210 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 SYT5O00445 386 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 EPPINO95925 133 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 CD1EP15812 388 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 S1PR1P21453 382 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 DNAJA1P31689 397 aaKnown RBP16.92■□□□□ 0.3
CLN6-220ENST00000637450 TRAF3Q13114 568 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 CCNYL2Q5T2Q4 361 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 FNDC7Q5VTL7 733 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 TTC19Q6DKK2 380 aaPredicted RBP16.92■□□□□ 0.3
CLN6-220ENST00000637450 C8orf74Q6P047 294 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 PAGE2Q7Z2X7 111 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 METTL4Q8N3J2 472 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 C17orf47Q8NEP4 570 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 OR7G1Q8NGA0 311 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 SLC44A1Q8WWI5 657 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 RILPQ96NA2 401 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 TIMP4Q99727 224 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 MRPL1Q9BYD6 325 aaKnown RBP16.92■□□□□ 0.3
CLN6-220ENST00000637450 UBQLN3Q9H347 655 aa16.92■□□□□ 0.3
CLN6-220ENST00000637450 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLN6-220ENST00000637450 C15orf38-AP3S2A0A0A6YYH1 394 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 CTAG2O75638 210 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 TRAPPC6AO75865 159 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 ACSL3O95573 720 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 HPNP05981 417 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 CPMP14384 443 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 PORP16435 677 aaPredicted RBP16.91■□□□□ 0.3
CLN6-220ENST00000637450 CEACAM8P31997 349 aaPredicted RBP16.91■□□□□ 0.3
CLN6-220ENST00000637450 CASP3P42574 277 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 TMED10P49755 219 aaKnown RBP16.91■□□□□ 0.3
CLN6-220ENST00000637450 NRG3P56975 720 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 CRYZQ08257 329 aaKnown RBP16.91■□□□□ 0.3
CLN6-220ENST00000637450 IFT88Q13099 833 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 GGTA1PQ4G0N0 100 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 MILR1Q7Z6M3 343 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 PACS2Q86VP3 889 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 TRPC4APQ8TEL6 797 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 NRGNQ92686 78 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 NTNG2Q96CW9 530 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 GNRHR2Q96P88 292 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 CES1P1Q9UKY3 287 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 NINQ8N4C6 2090 aa16.91■□□□□ 0.3
CLN6-220ENST00000637450 SMIM24O75264 130 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 COL6A2P12110 1019 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 NT5EP21589 574 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 TIMP3P35625 211 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 CDK9P50750 372 aaKnown RBP16.9■□□□□ 0.3
CLN6-220ENST00000637450 ART1P52961 327 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 RPP38P78345 283 aaKnown RBP16.9■□□□□ 0.3
CLN6-220ENST00000637450 CKAP4Q07065 602 aaKnown RBP16.9■□□□□ 0.3
CLN6-220ENST00000637450 MGAT2Q10469 447 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 ACSF3Q4G176 576 aaPredicted RBP16.9■□□□□ 0.3
CLN6-220ENST00000637450 SGO1Q5FBB7 561 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 VASNQ6EMK4 673 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 ZZZ3Q8IYH5 903 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 NAXEQ8NCW5 288 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 TNIP2Q8NFZ5 429 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 OR4F6Q8NGB9 312 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 PRDM14Q9GZV8 571 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 DNAJB12Q9NXW2 375 aaKnown RBP16.9■□□□□ 0.3
CLN6-220ENST00000637450 XPR1Q9UBH6 696 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 PCDHA9Q9Y5H5 950 aa16.9■□□□□ 0.3
CLN6-220ENST00000637450 ZNF469Q96JG9 3925 aaPredicted RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 ANKHD1Q8IWZ3 2542 aaKnown RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 A0A1B0GTL3 188 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 KDM4EB2RXH2 506 aaPredicted RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 DVL2O14641 736 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 ABCB1P08183 1280 aaPredicted RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 INHBAP08476 426 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 NAGAP17050 411 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 GPX3P22352 226 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 ABCD3P28288 659 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 PEX19P40855 299 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 SERPINB9P50453 376 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 MAPK12P53778 367 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 MAP4K2Q12851 820 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 SNTB1Q13884 538 aaKnown RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 TSNAXIP1Q2TAA8 658 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 NHSL2Q5HYW2 709 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 C6orf163Q5TEZ5 329 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 SLC48A1Q6P1K1 146 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 POMZP3Q6PJE2 187 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 COMMD6Q7Z4G1 85 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 LACC1Q8IV20 430 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 PM20D2Q8IYS1 436 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 PRR22Q8IZ63 422 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 RELL2Q8NC24 303 aaPredicted RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 TMEM41AQ96HV5 264 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 MRPL57Q9BQC6 102 aaKnown RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 NXF5Q9H1B4 397 aaKnown RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 CDC42EP4Q9H3Q1 356 aaKnown RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 ELOVL6Q9H5J4 265 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms