RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 METTL2BQ6P1Q9 378 aaKnown RBP15.01□□□□□ -0.01
CLN3-255ENST00000637100 CENPLQ8N0S6 344 aaPredicted RBP15.01□□□□□ -0.01
CLN3-255ENST00000637100 DOK4Q8TEW6 326 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 UCN3Q969E3 161 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 GNRHR2Q96P88 292 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 GAL3ST4Q96RP7 486 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 MTERF1Q99551 399 aaKnown RBP15.01□□□□□ -0.01
CLN3-255ENST00000637100 TRIM31Q9BZY9 425 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 WHRNQ9P202 907 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 TXNDC16Q9P2K2 825 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 KIAA1549Q9HCM3 1950 aa15.01□□□□□ -0.01
CLN3-255ENST00000637100 A0A1B0GTL3 188 aa15□□□□□ -0.01
CLN3-255ENST00000637100 A0A1W2PS29 197 aa15□□□□□ -0.01
CLN3-255ENST00000637100 PGRMC2O15173 223 aa15□□□□□ -0.01
CLN3-255ENST00000637100 OR10H2O60403 315 aa15□□□□□ -0.01
CLN3-255ENST00000637100 SEMA3DO95025 777 aa15□□□□□ -0.01
CLN3-255ENST00000637100 LRATO95237 230 aa15□□□□□ -0.01
CLN3-255ENST00000637100 AIFM1O95831 613 aa15□□□□□ -0.01
CLN3-255ENST00000637100 HRGP04196 525 aa15□□□□□ -0.01
CLN3-255ENST00000637100 LTA4HP09960 611 aaKnown RBP15□□□□□ -0.01
CLN3-255ENST00000637100 NR2F6P10588 404 aa15□□□□□ -0.01
CLN3-255ENST00000637100 CD53P19397 219 aa15□□□□□ -0.01
CLN3-255ENST00000637100 CRABP2P29373 138 aa15□□□□□ -0.01
CLN3-255ENST00000637100 SSTR4P31391 388 aa15□□□□□ -0.01
CLN3-255ENST00000637100 TMED10P49755 219 aaKnown RBP15□□□□□ -0.01
CLN3-255ENST00000637100 RAP1GDS1P52306 607 aa15□□□□□ -0.01
CLN3-255ENST00000637100 DCST1Q5T197 706 aa15□□□□□ -0.01
CLN3-255ENST00000637100 TIGD3Q6B0B8 471 aa15□□□□□ -0.01
CLN3-255ENST00000637100 TMEM64Q6YI46 380 aa15□□□□□ -0.01
CLN3-255ENST00000637100 C3orf62Q6ZUJ4 267 aa15□□□□□ -0.01
CLN3-255ENST00000637100 CCDC91Q7Z6B0 441 aa15□□□□□ -0.01
CLN3-255ENST00000637100 PACS2Q86VP3 889 aa15□□□□□ -0.01
CLN3-255ENST00000637100 TEX9Q8N6V9 391 aa15□□□□□ -0.01
CLN3-255ENST00000637100 WFDC11Q8NEX6 87 aa15□□□□□ -0.01
CLN3-255ENST00000637100 ERP44Q9BS26 406 aa15□□□□□ -0.01
CLN3-255ENST00000637100 EPB41L4BQ9H329 900 aa15□□□□□ -0.01
CLN3-255ENST00000637100 GRHL1Q9NZI5 618 aa15□□□□□ -0.01
CLN3-255ENST00000637100 RNF14Q9UBS8 474 aa15□□□□□ -0.01
CLN3-255ENST00000637100 A0A1W2PPR1 153 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 GLOD5A6NK44 160 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 ACTL6AO96019 429 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 ABCB1P08183 1280 aaPredicted RBP14.99□□□□□ -0.01
CLN3-255ENST00000637100 CT62P0C5K7 136 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 RHOXF2BP0C7M4 288 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 SOX18P35713 384 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 PTGDSP41222 190 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 NAGLUP54802 743 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 MGAT2Q10469 447 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 OR52E8Q6IFG1 317 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 CAPN12Q6ZSI9 719 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 CMC1Q7Z7K0 106 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 GALNT12Q8IXK2 581 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 OR7G1Q8NGA0 311 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 HGDQ93099 445 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 NXNL1Q96CM4 212 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 C18orf12Q96KH6 178 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 JSRP1Q96MG2 331 aaPredicted RBP14.99□□□□□ -0.01
CLN3-255ENST00000637100 ZFP3Q96NJ6 502 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 WDR41Q9HAD4 459 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 SAYSD1Q9NPB0 183 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 TEX10Q9NXF1 929 aaPredicted RBP14.99□□□□□ -0.01
CLN3-255ENST00000637100 ZNF639Q9UID6 485 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 SLC6A5Q9Y345 797 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 SAR1BQ9Y6B6 198 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 DOCK7Q96N67 2140 aa14.99□□□□□ -0.01
CLN3-255ENST00000637100 CLCA1A8K7I4 914 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 SUPT3HB4E1H0 165 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 SUPT3HO75486 399 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 ABCD3P28288 659 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 SLCO1A2P46721 670 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 ALDH18A1P54886 795 aaKnown RBP14.98□□□□□ -0.01
CLN3-255ENST00000637100 RPP38P78345 283 aaKnown RBP14.98□□□□□ -0.01
CLN3-255ENST00000637100 GUCY2DQ02846 1103 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 MAP4K2Q12851 820 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 SNTA1Q13424 505 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 DDX39BQ13838 428 aaKnown RBP14.98□□□□□ -0.01
CLN3-255ENST00000637100 KBTBD12Q3ZCT8 623 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 EIPR1Q53HC9 387 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 TBC1D1Q86TI0 1168 aaPredicted RBP14.98□□□□□ -0.01
CLN3-255ENST00000637100 CXorf67Q86X51 503 aaPredicted RBP14.98□□□□□ -0.01
CLN3-255ENST00000637100 NUDT13Q86X67 352 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 C9orf106Q8NAJ2 232 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 LINC01560Q8TB33 94 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 SMPDL3BQ92485 455 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 EXT2Q93063 718 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 ABTB1Q969K4 478 aaPredicted RBP14.98□□□□□ -0.01
CLN3-255ENST00000637100 ISL2Q96A47 359 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 REPS1Q96D71 796 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 ARSGQ96EG1 525 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 DACH2Q96NX9 599 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 GPR78Q96P69 363 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 G6PC3Q9BUM1 346 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 OR10A5Q9H207 317 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 BEX4Q9NWD9 120 aaPredicted RBP14.98□□□□□ -0.01
CLN3-255ENST00000637100 ADAM29Q9UKF5 820 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 CES1P1Q9UKY3 287 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 ACOT9Q9Y305 439 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 EXPH5Q8NEV8 1989 aa14.98□□□□□ -0.01
CLN3-255ENST00000637100 HMX2A2RU54 273 aa14.97□□□□□ -0.01
CLN3-255ENST00000637100 FAM187AA6NFU0 413 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms