RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SRFP11831 508 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 BSGP35613 385 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 BCL6P41182 706 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 SLC19A1P41440 591 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 PPP5CP53041 499 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 C21orf58P58505 322 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 RPP38P78345 283 aaKnown RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 ANXA8L1Q5VT79 327 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 PHF10Q8WUB8 498 aaKnown RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 TMBIM1Q969X1 311 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 CXorf40BQ96DE9 158 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 POM121Q96HA1 1249 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 CEP19Q96LK0 163 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 MYNNQ9NPC7 610 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 LHX9Q9NQ69 397 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 DCAF13Q9NV06 445 aaKnown RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 AHSPQ9NZD4 102 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 COLEC10Q9Y6Z7 277 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 TBX1O43435 398 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 ASNA1O43681 348 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 XPNPEP2O43895 674 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 APBB3O95704 486 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 CELA2BP08218 269 aaPredicted RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 FCGR1AP12314 374 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 GPX2P18283 190 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 GTF2E2P29084 291 aaKnown RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 CRATP43155 626 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 ALDH3A2P51648 485 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 GABREP78334 506 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 ACY1Q03154 408 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 GAS6Q14393 721 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 COX20Q5RI15 118 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 IDO2Q6ZQW0 420 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 MAMDC2Q7Z304 686 aaPredicted RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 AMIGO1Q86WK6 493 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 PTOV1Q86YD1 416 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 LACC1Q8IV20 430 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 NAGSQ8N159 534 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 SLC22A18ASQ8N1D0 253 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 DENND6BQ8NEG7 585 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 OR2L3Q8NG85 312 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 OR6F1Q8NGZ6 308 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 UGT2B28Q9BY64 529 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 AICDAQ9GZX7 198 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 FAM118AQ9NWS6 357 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 SLC39A1Q9NY26 324 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 BTNL2Q9UIR0 455 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 C1orf226A1L170 272 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 PTGES3LE9PB15 166 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 TMPRSS11DO60235 418 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 NOBOXO60393 691 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 ALX3O95076 343 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 THRBP10828 461 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 PCSK2P16519 638 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 POU6F2P78424 691 aaPredicted RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 UBXN2BQ14CS0 331 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 PAGE2Q7Z2X7 111 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 CAMKMTQ7Z624 323 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 UBE3DQ7Z6J8 389 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 ZZZ3Q8IYH5 903 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 IL17RDQ8NFM7 739 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 OR10Z1Q8NGY1 313 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 TM4SF18Q96CE8 201 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 TEX10Q9NXF1 929 aaPredicted RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 TAAR2Q9P1P5 351 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 USP36Q9P275 1121 aaKnown RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 SLC1A7O00341 560 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 BTN3A3O00478 584 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 RNASET2O00584 256 aaKnown RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 SLC22A1O15245 554 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 NDUFS4O43181 175 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 PRICKLE3O43900 615 aaPredicted RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 PRKRAO75569 313 aaKnown RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 PRSS23O95084 383 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 CST1P01037 141 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 SOAT1P35610 550 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 MASP1P48740 699 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 VAC14Q08AM6 782 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 C1orf61Q13536 156 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 DAG1Q14118 895 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 VMACQ2NL98 169 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 ATAD3CQ5T2N8 411 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 LINC00299Q6ZSB3 139 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 Q7L0L9 218 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 GDPD3Q7L5L3 318 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 NRROSQ86YC3 692 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 CHAC2Q8WUX2 184 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 SLC35A5Q9BS91 424 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 BDH2Q9BUT1 245 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 BHLHE41Q9C0J9 482 aaPredicted RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 SNX11Q9Y5W9 270 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 U3KQV3 271 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 A0A1W2PRB8 838 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 FAM172BPA6NC97 362 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 GLOD5A6NK44 160 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 ZNF99A8MXY4 864 aaPredicted RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 LINC01387J3KSC0 135 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms