RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OR52E4Q8NGH9 312 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 ZFP28Q8NHY6 868 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 NCLNQ969V3 563 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 CCDC74AQ96AQ1 378 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 ARHGAP9Q9BRR9 750 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 ASPSCR1Q9BZE9 553 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 RAD21L1Q9H4I0 556 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 LYRM4Q9HD34 91 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 ARMC1Q9NVT9 282 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 IRAK4Q9NWZ3 460 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 PLCL2Q9UPR0 1127 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 AURKCQ9UQB9 309 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 NAALAD2Q9Y3Q0 740 aa8.93□□□□□ -0.98
PDLIM5-223ENST00000627587 RNF103-CHMP3A0A140T963 221 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM229AB2RXF0 380 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 CYR61O00622 381 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 FOXS1O43638 330 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 CREG1O75629 220 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 KRT75O95678 551 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 ETFAP13804 333 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 IL10P22301 178 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 CD82P27701 267 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 PEX2P28328 305 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 SLC5A2P31639 672 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 GPC1P35052 558 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 CRATP43155 626 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 ARL4DP49703 201 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 NCBP2P52298 156 aaKnown RBP eCLIP8.92□□□□□ -0.982e-10■□□□□ 8.4
PDLIM5-223ENST00000627587 EEF1A2Q05639 463 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 FADDQ13158 208 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 VMACQ2NL98 169 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 TCTE1Q5JU00 501 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 LPCAT4Q643R3 524 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 SAXO2Q658L1 398 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 ENPP6Q6UWR7 440 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 SAMD14Q8IZD0 417 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 OR52N2Q8NGI0 321 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 LRTOMTQ8WZ04 291 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 MAL2Q969L2 176 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 FAM162AQ96A26 154 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 NUDT22Q9BRQ3 303 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 TACO1Q9BSH4 297 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 LRRN3Q9H3W5 708 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 SERHL2Q9H4I8 314 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 ANKHQ9HCJ1 492 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 PRDM9Q9NQV7 894 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 ZNF780BQ9Y6R6 833 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 TENM4Q6N022 2769 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 MGAQ8IWI9 3026 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 NUP210LQ5VU65 1888 aa8.92□□□□□ -0.98
PDLIM5-223ENST00000627587 TIPRLO75663 272 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 JMJD7P0C870 316 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 C8orf89P0DMQ9 161 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 LIPCP11150 499 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 BMP2P12643 396 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 CSNK2A2P19784 350 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 MPIP34949 423 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 CCL7P80098 99 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 HSD11B2P80365 405 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 CLPPQ16740 277 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SPDYE7PQ495Y7 208 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 TBCELQ5QJ74 424 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 OGFRL1Q5TC84 451 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 OR52E8Q6IFG1 317 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 NIPAL1Q6NVV3 410 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 WDR74Q6RFH5 385 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 ZNF574Q6ZN55 896 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 GALNT10Q86SR1 603 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 RNF130Q86XS8 419 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 OR9A4Q8NGU2 314 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 POP5Q969H6 163 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 PPWD1Q96BP3 646 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 NEURL3Q96EH8 262 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 NPLQ9BXD5 320 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 VCX3BQ9H321 246 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SYNDIG1Q9H7V2 258 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 ENAMQ9NRM1 1142 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 DCAF13Q9NV06 445 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 AKAP7Q9P0M2 348 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 IL17BQ9UHF5 180 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 ANAPC2Q9UJX6 822 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 FAF1Q9UNN5 650 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM184BQ9Y519 407 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SEC16AO15027 2179 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 A0A1W2PQM1 296 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 FITM1A5D6W6 292 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 D6RAR5 112 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 FAM227AF5H4B4 570 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SGK494L7N484 410 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 EFSO43281 561 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 HNRNPRO43390 633 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 RPLP0P05388 317 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 FEN1P39748 380 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 GCGRP47871 477 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SEPHS1P49903 392 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 PDX1P52945 283 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 RPS26P62854 115 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 VEZF1Q14119 521 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 FAM53BQ14153 422 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 TRIP10Q15642 601 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms