RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ZDHHC2Q9UIJ5 367 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-208ENST00000626828 TMED5Q9Y3A6 229 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 CLEC18AA5D8T8 446 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 TMEM114B3SHH9 223 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF354AO60765 605 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CLPSP04118 112 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 MST1P26927 711 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 PMP22Q01453 160 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CASP8Q14790 479 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 EBPQ15125 230 aaKnown RBP15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CEBPEQ15744 281 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CHI3L2Q15782 390 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 HHATQ5VTY9 493 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CLEC18BQ6UXF7 455 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 IKBIPQ70UQ0 350 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 DND1Q8IYX4 353 aaKnown RBP15.48■□□□□ 0.07
UBE3D-208ENST00000626828 GOLM1Q8NBJ4 401 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CLEC18CQ8NCF0 446 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 PSD4Q8NDX1 1056 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 ADCY4Q8NFM4 1077 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 OR2T11Q8NH01 316 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CDC26Q8NHZ8 85 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 ERP27Q96DN0 273 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 PKNOX2Q96KN3 472 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 PPP3R2Q96LZ3 170 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 BBS4Q96RK4 519 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 GAL3ST4Q96RP7 486 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 TMBIM4Q9HC24 238 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 MIEF1Q9NQG6 463 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 MAT2BQ9NZL9 334 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 BCAP29Q9UHQ4 241 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 ENTPD4Q9Y227 616 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 PTGDR2Q9Y5Y4 395 aa15.48■□□□□ 0.07
UBE3D-208ENST00000626828 FLNBO75369 2602 aaKnown RBP15.48■□□□□ 0.07
UBE3D-208ENST00000626828 CAPN14A8MX76 684 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 TMEM233B4DJY2 109 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 PIP5K1BO14986 540 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 LSM1O15116 133 aaKnown RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 ZIC2O95409 532 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 NADKO95544 446 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 HSPA4LO95757 839 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 CNR1P21554 472 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 ARRB2P32121 409 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 NR0B1P51843 470 aaKnown RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 TDGF1P3P51864 188 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 SLC18A1P54219 525 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 ABCE1P61221 599 aaKnown RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF791Q3KP31 576 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 RFTN2Q52LD8 501 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 TRMT12Q53H54 448 aaKnown RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 SLC22A10Q63ZE4 541 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 FAM180BQ6P0A1 224 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 GFRALQ6UXV0 394 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 TICAM1Q8IUC6 712 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 KIRREL3Q8IZU9 778 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 C17orf47Q8NEP4 570 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 AGR3Q8TD06 166 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF675Q8TD23 568 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 FCRL1Q96LA6 429 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 FRMD6Q96NE9 622 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 PAIP2Q9BPZ3 127 aaKnown RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 SEC14L3Q9UDX4 400 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 PRODH2Q9UF12 536 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 USP9XQ93008 2570 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-208ENST00000626828 DNAJC13O75165 2243 aa15.47■□□□□ 0.07
UBE3D-208ENST00000626828 MYO1GB0I1T2 1018 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 ITM2AO43736 263 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 P04436 131 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 MEOX1P50221 254 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 NRG3P56975 720 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 MAGOHP61326 146 aaKnown RBP15.46■□□□□ 0.07
UBE3D-208ENST00000626828 DCAF7P61962 342 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 DUSP2Q05923 314 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 SRSF1Q07955 248 aaKnown RBP eCLIP15.46■□□□□ 0.07
UBE3D-208ENST00000626828 STX3Q13277 289 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 GALNTL6Q49A17 601 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 CPSF7Q8N684 471 aaKnown RBP15.46■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF441Q8N8Z8 693 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 ZFP62Q8NB50 900 aaPredicted RBP15.46■□□□□ 0.07
UBE3D-208ENST00000626828 C16orf52Q8NHV5 167 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 ADIPOR1Q96A54 375 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 SPACA9Q96E40 222 aaPredicted RBP15.46■□□□□ 0.07
UBE3D-208ENST00000626828 EGLN2Q96KS0 407 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 SACM1LQ9NTJ5 587 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 RAP2CQ9Y3L5 183 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 NPFFR2Q9Y5X5 522 aa15.46■□□□□ 0.07
UBE3D-208ENST00000626828 SPTBN1Q01082 2364 aaKnown RBP15.46■□□□□ 0.06
UBE3D-208ENST00000626828 TMEM120BA0PK00 339 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 NPIPA5E9PKD4 350 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 ASNA1O43681 348 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 AGFG2O95081 481 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 UNC5CO95185 931 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 FBXO45P0C2W1 286 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 TACR1P25103 407 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 MAPK1P28482 360 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 SOX18P35713 384 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 ASMTP46597 345 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 SLC1A6P48664 564 aa15.45■□□□□ 0.06
UBE3D-208ENST00000626828 SRSF11Q05519 484 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms