RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
SNX1-214ENST00000625244 SYT10Q6XYQ8 523 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 SLC29A4Q7RTT9 530 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 WFDC8Q8IUA0 241 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 OR2L5Q8NG80 312 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 OR1J4Q8NGS1 313 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 SMAP2Q8WU79 429 aaPredicted RBP12.53□□□□□ -0.4
SNX1-214ENST00000625244 NEUROG1Q92886 237 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 MAGOHBQ96A72 148 aaKnown RBP12.53□□□□□ -0.4
SNX1-214ENST00000625244 REPS1Q96D71 796 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 FBXL20Q96IG2 436 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 ZNF845Q96IR2 970 aaPredicted RBP12.53□□□□□ -0.4
SNX1-214ENST00000625244 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 HS6ST2Q96MM7 605 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 DGAT2Q96PD7 388 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 SOX13Q9UN79 622 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 DLGAP4Q9Y2H0 992 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 DYRK1BQ9Y463 629 aa12.53□□□□□ -0.4
SNX1-214ENST00000625244 KMT2CQ8NEZ4 4911 aaKnown RBP12.52□□□□□ -0.4
SNX1-214ENST00000625244 FGF17O60258 216 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 OR10H2O60403 315 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 GUCA1CO95843 209 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 CD8BP10966 210 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 DPP4P27487 766 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 CLDN18P56856 261 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 HERVK_113P63132 956 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 ERVK-8P63133 956 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 IGLV3-21P80748 117 aaPredicted RBP12.52□□□□□ -0.41
SNX1-214ENST00000625244 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 FAM120AOSQ5T036 256 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 OR2A2Q6IF42 318 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 ADAM5Q6NVV9 412 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 TRIM40Q6P9F5 258 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 ANGPTL8Q6UXH0 198 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 THOC6Q86W42 341 aaKnown RBP12.52□□□□□ -0.41
SNX1-214ENST00000625244 TAGAPQ8N103 731 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 MYO1HQ8N1T3 1032 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.52□□□□□ -0.41
SNX1-214ENST00000625244 GPATCH11Q8N954 259 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 OR10H5Q8NGA6 315 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 OR14L1PQ8NHC6 308 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 RDH11Q8TC12 318 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 GRK7Q8WTQ7 553 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 FBXL8Q96CD0 374 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 LCORQ96JN0 433 aaPredicted RBP12.52□□□□□ -0.41
SNX1-214ENST00000625244 MAPKAP1Q9BPZ7 522 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 ERVK-6Q9BXR3 956 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 REXO4Q9GZR2 422 aaKnown RBP12.52□□□□□ -0.41
SNX1-214ENST00000625244 TRMT6Q9UJA5 497 aaKnown RBP12.52□□□□□ -0.41
SNX1-214ENST00000625244 RNF112Q9ULX5 631 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 ERVK-19Q9WJR5 959 aa12.52□□□□□ -0.41
SNX1-214ENST00000625244 IQANK1A0A1B0GTG1 560 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 EMC8O43402 210 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 CLPSP04118 112 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 IGHV4-31P0DP07 118 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 ZNF708P17019 499 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 SLC1A2P43004 574 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 RGS4P49798 205 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 SLC37A1P57057 533 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 LRRC8EQ6NSJ5 796 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 PAQR3Q6TCH7 311 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 RNF111Q6ZNA4 994 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 SGMS2Q8NHU3 365 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 FBXW5Q969U6 566 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 OR2B2Q9GZK3 357 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 CHODLQ9H9P2 273 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 COPS7BQ9H9Q2 264 aaPredicted RBP12.51□□□□□ -0.41
SNX1-214ENST00000625244 BARX1Q9HBU1 254 aaPredicted RBP12.51□□□□□ -0.41
SNX1-214ENST00000625244 LYRM4Q9HD34 91 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 SERHLQ9NQF3 203 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 RYDENQ9NUL5 291 aaKnown RBP12.51□□□□□ -0.41
SNX1-214ENST00000625244 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNX1-214ENST00000625244 PAK5Q9P286 719 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 SLC22A14Q9Y267 594 aa12.51□□□□□ -0.41
SNX1-214ENST00000625244 A0A0G2JK05 382 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 CDC7O00311 574 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 DYRK3O43781 588 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 HAUS5O94927 633 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 CD8AP01732 235 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 PPP3CBP16298 524 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 FNTAP49354 379 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 AP1S2P56377 157 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 PCDH1Q08174 1060 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 ZNF267Q14586 743 aaPredicted RBP12.5□□□□□ -0.41
SNX1-214ENST00000625244 PGGHGQ32M88 737 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 ADNP2Q6IQ32 1131 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
SNX1-214ENST00000625244 TMIGD1Q6UXZ0 262 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 ZNF793Q6ZN11 406 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 FIG4Q92562 907 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 RBM18Q96H35 190 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms