RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 TXNL1O43396 289 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 JUNP05412 331 aaKnown RBP8.52□□□□□ -1.05
VCL-206ENST00000623461 SFTPBP07988 381 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 IL4RP24394 825 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 BEX3Q00994 111 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 SCAPQ12770 1279 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 NMNAT1Q9HAN9 279 aaPredicted RBP8.52□□□□□ -1.05
VCL-206ENST00000623461 OR6C2Q9NZP2 312 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 MRPL15Q9P015 296 aaKnown RBP8.52□□□□□ -1.05
VCL-206ENST00000623461 SARDHQ9UL12 918 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 DLGAP4Q9Y2H0 992 aa8.52□□□□□ -1.05
VCL-206ENST00000623461 CDK2P24941 298 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 RPL10P27635 214 aaKnown RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 ETV6P41212 452 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 CLDN10P78369 228 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 CDNFQ49AH0 187 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SPATC1Q76KD6 591 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 DGLUCYQ7Z3D6 616 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 TMPRSS12Q86WS5 348 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 OR10G6Q8NH81 332 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SULT4A1Q9BR01 284 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 LALBAP00709 142 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 TAS2R31P59538 309 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 DUSP6Q16828 381 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 MTFR2Q6P444 385 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 TMIGD1Q6UXZ0 262 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SLC16A9Q7RTY1 509 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 DTX3Q8N9I9 347 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZFAND1Q8TCF1 268 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ARMC5Q96C12 935 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 CDC6Q99741 560 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 MRPS17Q9Y2R5 130 aaKnown RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 TMEM14AQ9Y6G1 99 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 CTDSP2O14595 271 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 OR4Q2P0C623 313 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZNF35P13682 527 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 TDGQ13569 410 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SLC46A3Q7Z3Q1 461 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 TPRA1Q86W33 373 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 OR4K1Q8NGD4 311 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 UPF1Q92900 1129 aaKnown RBP eCLIP8.51□□□□□ -1.054e-21■■■■□ 24.8
VCL-206ENST00000623461 SCML2Q9UQR0 700 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 RGPD2P0DJD1 1756 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 LOC105369274A0A096LPK9 316 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 hCG_1807616A0A1W2PRN6 198 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 STMND1H3BQB6 276 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 PYCR1P32322 319 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 BTG1P62324 171 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZNF616Q08AN1 781 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ENPP2Q13822 863 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 VGLL4Q14135 290 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 CLPPQ16740 277 aaPredicted RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 ARHGAP11AQ6P4F7 1023 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 POMZP3Q6PJE2 187 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 OR4N4Q8N0Y3 316 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ANKRD53Q8N9V6 530 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ANKK1Q8NFD2 765 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SLC7A6Q92536 515 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 WDR26Q9H7D7 661 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ABRACLQ9P1F3 81 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SIX4Q9UIU6 781 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 PCDHA9Q9Y5H5 950 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 LRRC37A3O60309 1634 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ARL5CA6NH57 179 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SLC16A6O15403 523 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZNF30P17039 623 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 BTG3Q14201 252 aaPredicted RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 MAPK14Q16539 360 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 VARS2Q5ST30 1063 aaKnown RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 FAM205BPQ63HN1 556 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ESX1Q8N693 406 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZNF565Q8N9K5 539 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZNF384Q8TF68 577 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 XYLT2Q9H1B5 865 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 BTNL2Q9UIR0 455 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 WASH3PC4AMC7 463 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ADH1CP00326 375 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 IFNA5P01569 189 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 MRPL3P09001 348 aaKnown RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 ARSBP15848 533 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 AHCYP23526 432 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 CHATP28329 748 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 PTH2RP49190 550 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ILF3Q12906 894 aaKnown RBP eCLIP8.51□□□□□ -1.052e-7■□□□□ 8.1
VCL-206ENST00000623461 ALG1LQ6GMV1 187 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 OR6V1Q8N148 313 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZFP41Q8N8Y5 198 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 C7orf57Q8NEG2 295 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 OR2T11Q8NH01 316 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ZNF304Q9HCX3 659 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 NME7Q9Y5B8 376 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 PHYHO14832 338 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 TREHO43280 583 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SLURP2P0DP57 97 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 HSD11B1P28845 292 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 SSTR2P30874 369 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms