RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PLA1AQ53H76 456 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 MZT2AQ6P582 158 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 RASGRP3Q8IV61 690 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 APCDD1Q8J025 514 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 OR11H4Q8NGC9 324 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 OR4D11Q8NGI4 311 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 WDR48Q8TAF3 677 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 SLC7A13Q8TCU3 470 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 C16orf78Q8WTQ4 265 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 SLC38A5Q8WUX1 472 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 FOXJ1Q92949 421 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 WFDC6Q9BQY6 131 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 FUZQ9BT04 418 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 RANBP3Q9H6Z4 567 aaPredicted RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 MVB12BQ9H7P6 319 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 SYNDIG1Q9H7V2 258 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 STOX2Q9P2F5 926 aaPredicted RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 ASB4Q9Y574 426 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 C5orf58C9J3I9 102 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 TRIM77I1YAP6 450 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 SH3BP5O60239 455 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 NME6O75414 186 aaPredicted RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 PAHP00439 452 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 OR12D1P0DN82 309 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 CSTF1Q05048 431 aaKnown RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 RAB40BQ12829 278 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 DUSP6Q16828 381 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 IER5LQ5T953 404 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 TPRG1Q6ZUI0 275 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 SHFQ7M4L6 423 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 MARCH9Q86YJ5 346 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ZNF655Q8N720 491 aaPredicted RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 ARIH2OSQ8N7S6 290 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ZNF366Q8N895 744 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 PDXPQ96GD0 296 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 LYSMD1Q96S90 227 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ARHGAP9Q9BRR9 750 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 TMED9Q9BVK6 235 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 RNF32Q9H0A6 362 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 EMC7Q9NPA0 242 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ZNF222Q9UK12 451 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ADAM30Q9UKF2 790 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 LANCL1O43813 399 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 LZTS3O60299 673 aaPredicted RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 KLHL18O94889 574 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 LALBAP00709 142 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 LIMS3P0CW19 117 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 LIMS4P0CW20 117 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 ELK1P19419 428 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 TM4SF4P48230 202 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 GIPRP48546 466 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 TAS2R50P59544 299 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 EFNB1P98172 346 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 DSG2Q14126 1118 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 INSL4Q14641 139 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 COL28A1Q2UY09 1125 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 FAM71E1Q6IPT2 247 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 ASB18Q6ZVZ8 466 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 KCTD20Q7Z5Y7 419 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 HORMAD2Q8N7B1 307 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 NEIL3Q8TAT5 605 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 PRR14Q9BWN1 585 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 TBC1D17Q9HA65 648 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 MRPS18AQ9NVS2 196 aaKnown RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 SLCO1C1Q9NYB5 712 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 TAS2R7Q9NYW3 318 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 EXTL2Q9UBQ6 330 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 FBXW2Q9UKT8 454 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 RPS10-NUDT3A0A1W2PQS6 291 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 SLC19A2O60779 497 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 TSPAN9O75954 239 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 STOMP27105 288 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 CCND3P30281 292 aaPredicted RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 MAPK8P45983 427 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 AANATQ16613 207 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 UAP1L1Q3KQV9 507 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 RTP2Q5QGT7 225 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 GPR139Q6DWJ6 353 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 FAM180BQ6P0A1 224 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 MED27Q6P2C8 311 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 TNFAIP8L2Q6P589 184 aaPredicted RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 PODNL1Q6PEZ8 512 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 CDH24Q86UP0 819 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 KIF18BQ86Y91 864 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 GALNT11Q8NCW6 608 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 NEIL2Q969S2 332 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 TMEM19Q96HH6 336 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 SORCS2Q96PQ0 1159 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 KLF16Q9BXK1 252 aaPredicted RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 CXorf36Q9H7Y0 433 aa13.35□□□□□ -0.27
LDB3-209ENST00000623056 EXOSC1Q9Y3B2 195 aaKnown RBP13.35□□□□□ -0.27
LDB3-209ENST00000623056 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ELNP15502 786 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 MMP11P24347 488 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms