RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PODNL1Q6PEZ8 512 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 NUDT18Q6ZVK8 323 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ADCK2Q7Z695 626 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 CACUL1Q86Y37 369 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 VANGL1Q8TAA9 524 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 KLHL6Q8WZ60 621 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 CNRIP1Q96F85 164 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 PRRC1Q96M27 445 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 OPALINQ96PE5 141 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 TRNT1Q96Q11 434 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 ARMC7Q9H6L4 198 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 KIR3DX1Q9H7L2 352 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 PRDM8Q9NQV8 689 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 TRNAU1APQ9NX07 287 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 ATG4BQ9Y4P1 393 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 PCDHGA4Q9Y5G9 962 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 RANBP2P49792 3224 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 A0A0G2JN53 185 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 A0A0G2JPF8 293 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 WASHC1A8K0Z3 465 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 HNRNPCL2B2RXH8 293 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 HNRNPCL3B7ZW38 293 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ARHGAP33O14559 1287 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 PGRMC2O15173 223 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 LATO43561 262 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ASNA1O43681 348 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 AIFM1O95831 613 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 FHP07954 510 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 IGFBP1P08833 259 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 HNRNPCL4P0DMR1 293 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 HOXB3P14651 431 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 POU1F1P28069 291 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 GPC1P35052 558 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 IGFALSP35858 605 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 KIR2DL1P43626 348 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 PIN1Q13526 163 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 ENTPD8Q5MY95 495 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 PPP2R2DQ66LE6 453 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 C1orf94Q6P1W5 598 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 WASH2PQ6VEQ5 465 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 WDR53Q7Z5U6 358 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 EGFL6Q8IUX8 553 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 LYSMD2Q8IV50 215 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 FBXL6Q8N531 539 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 FAM26EQ8N5C1 309 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ZNF513Q8N8E2 541 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 MFSD9Q8NBP5 474 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ZNF784Q8NCA9 323 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 OR56A1Q8NGH5 318 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 OR8K5Q8NH50 307 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 XAGE5Q8WWM1 108 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 TMEM80Q96HE8 168 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 IL4I1Q96RQ9 567 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 POLDIP3Q9BY77 421 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 SLC17A9Q9BYT1 436 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 TWSG1Q9GZX9 223 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 RNF167Q9H6Y7 350 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SP140LQ9H930 580 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SYNPO2LQ9H987 977 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SLC9A8Q9Y2E8 581 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 RPL36Q9Y3U8 105 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 PLEKHM1Q9Y4G2 1056 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 MDC1Q14676 2089 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 LOC100506127A0A0U1RQW1 187 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 OR52A4PA6NMU1 304 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 GRXCR1A8MXD5 290 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 M0R3H8 397 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SYT5O00445 386 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ERI3O43414 337 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 NME6O75414 186 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 PRKRAO75569 313 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 SOX14O95416 240 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 DBTP11182 482 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 F3P13726 295 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 FEN1P39748 380 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 WASP42768 502 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 TNFRSF4P43489 277 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 DUSP2Q05923 314 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.89□□□□□ -0.99
PDPN-212ENST00000621990 TARDBPQ13148 414 aaKnown RBP eCLIP8.89□□□□□ -0.99
PDPN-212ENST00000621990 SGCGQ13326 291 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 MED22Q15528 200 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 RPE65Q16518 533 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 TSTQ16762 297 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 TPRG1LQ5T0D9 272 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 FAM109BQ6ICB4 259 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 CASP12Q6UXS9 341 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ZER1Q7Z7L7 766 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 RBM12BQ8IXT5 1001 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 OR6T1Q8NGN1 323 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 WDR36Q8NI36 951 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 BBS4Q96RK4 519 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 CHCHD6Q9BRQ6 235 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 PINK1Q9BXM7 581 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 CPNE5Q9HCH3 593 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 HHATLQ9HCP6 504 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 IRAK4Q9NWZ3 460 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SCHIP1Q9P0W5 487 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 CFL2Q9Y281 166 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 PEX16Q9Y5Y5 336 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms