RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CTSL3PQ5NE16 218 aa8.78□□□□□ -1
GGA3-223ENST00000621870 WASH2PQ6VEQ5 465 aa8.78□□□□□ -1
GGA3-223ENST00000621870 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.78□□□□□ -1
GGA3-223ENST00000621870 YIPF7Q8N8F6 280 aa8.78□□□□□ -1
GGA3-223ENST00000621870 OR8J3Q8NGG0 315 aa8.78□□□□□ -1
GGA3-223ENST00000621870 OR14L1PQ8NHC6 308 aa8.78□□□□□ -1
GGA3-223ENST00000621870 LKAAEAR1Q8TD35 194 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ADAMTS18Q8TE60 1221 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SLC37A2Q8TED4 501 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ZFP3Q96NJ6 502 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ADOQ96SZ5 270 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ULBP3Q9BZM4 244 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SRA1Q9HD15 236 aaKnown RBP8.78□□□□□ -1
GGA3-223ENST00000621870 MBNL1Q9NR56 388 aaKnown RBP8.78□□□□□ -1
GGA3-223ENST00000621870 POU2F3Q9UKI9 436 aa8.78□□□□□ -1
GGA3-223ENST00000621870 VDAC3Q9Y277 283 aa8.78□□□□□ -1
GGA3-223ENST00000621870 C17orf113A0A1B0GUU1 675 aa8.77□□□□□ -1
GGA3-223ENST00000621870 H3BML4 177 aa8.77□□□□□ -1
GGA3-223ENST00000621870 K7ESM1 405 aa8.77□□□□□ -1
GGA3-223ENST00000621870 SNPHO15079 494 aa8.77□□□□□ -1
GGA3-223ENST00000621870 TNFRSF21O75509 655 aa8.77□□□□□ -1
GGA3-223ENST00000621870 HMGN2P05204 90 aaKnown RBP8.77□□□□□ -1
GGA3-223ENST00000621870 RPS17P08708 135 aaKnown RBP8.77□□□□□ -1
GGA3-223ENST00000621870 TACSTD2P09758 323 aa8.77□□□□□ -1
GGA3-223ENST00000621870 SDC1P18827 310 aa8.77□□□□□ -1
GGA3-223ENST00000621870 HIST1H1TP22492 207 aaPredicted RBP8.77□□□□□ -1
GGA3-223ENST00000621870 S100GP29377 79 aa8.77□□□□□ -1
GGA3-223ENST00000621870 GRIK2Q13002 908 aa8.77□□□□□ -1
GGA3-223ENST00000621870 GBX1Q14549 363 aa8.77□□□□□ -1
GGA3-223ENST00000621870 TYSND1Q2T9J0 566 aa8.77□□□□□ -1
GGA3-223ENST00000621870 CARD17Q5XLA6 110 aa8.77□□□□□ -1
GGA3-223ENST00000621870 KCTD11Q693B1 232 aa8.77□□□□□ -1
GGA3-223ENST00000621870 SHQ1Q6PI26 577 aaKnown RBP8.77□□□□□ -1
GGA3-223ENST00000621870 Q6ZS52 159 aa8.77□□□□□ -1
GGA3-223ENST00000621870 OR6N2Q8NGY6 317 aa8.77□□□□□ -1
GGA3-223ENST00000621870 PATE1Q8WXA2 126 aa8.77□□□□□ -1
GGA3-223ENST00000621870 FATE1Q969F0 183 aa8.77□□□□□ -1
GGA3-223ENST00000621870 MRGPRX1Q96LB2 322 aa8.77□□□□□ -1
GGA3-223ENST00000621870 SERINC2Q96SA4 455 aa8.77□□□□□ -1
GGA3-223ENST00000621870 HDAC8Q9BY41 377 aa8.77□□□□□ -1
GGA3-223ENST00000621870 BHLHE41Q9C0J9 482 aaPredicted RBP8.77□□□□□ -1
GGA3-223ENST00000621870 CHMP1AQ9HD42 196 aaPredicted RBP8.77□□□□□ -1
GGA3-223ENST00000621870 WBP11Q9Y2W2 641 aaKnown RBP8.77□□□□□ -1
GGA3-223ENST00000621870 SCRG1O75711 98 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 PENKP01210 267 aaPredicted RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 CAPN3P20807 821 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 DPP6P42658 865 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 SLC3A1Q07837 685 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 IL18Q14116 193 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 C6orf132Q5T0Z8 1188 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 WDR53Q7Z5U6 358 aaPredicted RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 VTCN1Q7Z7D3 282 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 RAB43Q86YS6 212 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 PIAS4Q8N2W9 510 aaPredicted RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 DENND6BQ8NEG7 585 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 UFD1Q92890 307 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 TBC1D20Q96BZ9 403 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 FAM129BQ96TA1 746 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 PDCD10Q9BUL8 212 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 C14orf105Q9NVL8 296 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 KLHL42Q9P2K6 505 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 NENFQ9UMX5 172 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 UBE2QL1A1L167 161 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 EFCAB7A8K855 629 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ACOT7O00154 380 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 PRODHO43272 600 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 HTRA2O43464 458 aaPredicted RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 UGDHO60701 494 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 PRAMEF2O60811 474 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 TNFRSF1BP20333 461 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ENDOUP21128 410 aaKnown RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 CDH15P55291 814 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 SELENOVP59797 346 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 CEACAM7Q14002 265 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 NPTX1Q15818 432 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 SLC14A2Q15849 920 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 TMEM196Q5HYL7 178 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ALG10BQ5I7T1 473 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ERMP1Q7Z2K6 904 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 OR51G2Q8NGK0 314 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 OR5K2Q8NHB8 316 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 CIDECQ96AQ7 238 aaPredicted RBP8.77□□□□□ -1.01
GGA3-223ENST00000621870 SLC30A3Q99726 388 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ACPTQ9BZG2 426 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 C1orf21Q9H246 121 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 TM9SF3Q9HD45 589 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 TIGARQ9NQ88 270 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 SNTG1Q9NSN8 517 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 NSG1A0A0A6YYJ2 146 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 FAM240BA0A1B0GVZ2 78 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 MROH6A6NGR9 719 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 TMX2-CTNND1H3BSU7 103 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 SOCS2O14508 198 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 FRS3O43559 492 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 AK1P00568 194 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 IMPA1P29218 277 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 GCGRP47871 477 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 CLCN2P51788 898 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 ARG2P78540 354 aa8.77□□□□□ -1.01
GGA3-223ENST00000621870 TFF2Q03403 129 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms