RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ADAMTS18Q8TE60 1221 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 GEMIN6Q8WXD5 167 aaKnown RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 MS4A4EQ96PG1 132 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 NUDT22Q9BRQ3 303 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 ACTRT3Q9BYD9 372 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 CAPN10Q9HC96 672 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 VNN3Q9NY84 501 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 UNC13CQ8NB66 2214 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 SPTBP11277 2137 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 PRAMEF27A3QJZ7 478 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 DLGAP1O14490 977 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 ATP1B1P05026 303 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 CRISP3P54108 245 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 CYP27C1Q4G0S4 372 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 ZNF628Q5EBL2 1059 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 TRIM61Q5EBN2 209 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 TMEM179BQ7Z7N9 219 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 KMT5CQ86Y97 462 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 HS3ST5Q8IZT8 346 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 EID2Q8N6I1 236 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 OR2I1PQ8NGU4 316 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 GATA6Q92908 595 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 ANKRD9Q96BM1 317 aaPredicted RBP20.12■□□□□ 0.81
SPAST-204ENST00000621856 REEP1Q9H902 201 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 NTMQ9P121 344 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 SLC6A14Q9UN76 642 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 ASXL3Q9C0F0 2248 aa20.12■□□□□ 0.81
SPAST-204ENST00000621856 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 CASC3O15234 703 aaKnown RBP20.11■□□□□ 0.81
SPAST-204ENST00000621856 CER1O95813 267 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 OR1E2P47887 323 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 ARHGDIAP52565 204 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 GPAT3Q53EU6 434 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 KRT73Q86Y46 540 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 OR2L13Q8N349 312 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 D2HGDHQ8N465 521 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 BBS10Q8TAM1 723 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 DOK4Q8TEW6 326 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 GIMAP5Q96F15 307 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 COL21A1Q96P44 957 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 TREX2Q9BQ50 279 aaPredicted RBP20.11■□□□□ 0.81
SPAST-204ENST00000621856 ADI1Q9BV57 179 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 CLK4Q9HAZ1 481 aaKnown RBP20.11■□□□□ 0.81
SPAST-204ENST00000621856 SEMA5BQ9P283 1151 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 GMEB2Q9UKD1 530 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 RP1P56715 2156 aa20.11■□□□□ 0.81
SPAST-204ENST00000621856 LY6G6EA0A0G2JKS1 128 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 ASNA1O43681 348 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 OR10H2O60403 315 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SERPINB7O75635 380 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 BMP10O95393 424 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 HPRP00739 348 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SP9P0CG40 484 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 EMP3P54852 163 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 MERTKQ12866 999 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SLC13A2Q13183 592 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 LPAL2Q16609 132 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SYT16Q17RD7 645 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 FAM214AQ32MH5 1076 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 PERM1Q5SV97 790 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 ATAD3BQ5T9A4 648 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SHQ1Q6PI26 577 aaKnown RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 FAM181AQ8N9Y4 354 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 ADAMTS15Q8TE58 950 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 CYGBQ8WWM9 190 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SLC41A2Q96JW4 573 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 RBM4BQ9BQ04 359 aaKnown RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 RBM4Q9BWF3 364 aaKnown RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 SMURF2Q9HAU4 748 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 CUTCQ9NTM9 273 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 IFT80Q9P2H3 777 aaPredicted RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 ATXN7L1Q9ULK2 861 aaPredicted RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 SH3GLB1Q9Y371 365 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SAMHD1Q9Y3Z3 626 aaKnown RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 U3KQA8 63 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 BLACEA4D250 179 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 PCDHGA12O60330 932 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 NME6O75414 186 aaPredicted RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 SLITRK5O94991 958 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 MFN2O95140 757 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 ALPLP05186 524 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 LYNP07948 512 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 ATXN8OSP0DMR3 200 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 ITGA2P17301 1181 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 DNAJA1P31689 397 aaKnown RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 IQCCQ4KMZ1 466 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 TRMT12Q53H54 448 aaKnown RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 MFSD12Q6NUT3 480 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 CDC73Q6P1J9 531 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 CHERPQ8IWX8 916 aaKnown RBP20.1■□□□□ 0.81
SPAST-204ENST00000621856 ZNF595Q8IYB9 648 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 DHRSXQ8N5I4 330 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 TFAP2CQ92754 450 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 ZNF347Q96SE7 839 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 PRTFDC1Q9NRG1 225 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 UBAP1Q9NZ09 502 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 NDUFAF4Q9P032 175 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 SEC14L3Q9UDX4 400 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 NDOR1Q9UHB4 597 aa20.1■□□□□ 0.81
SPAST-204ENST00000621856 KCNE3Q9Y6H6 103 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms