RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-229ENST00000620292 CTDNEP1O95476 244 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 LDOC1O95751 146 aaPredicted RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 IGHV4-34P06331 123 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CENPBP07199 599 aaPredicted RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 ABCB1P08183 1280 aaPredicted RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CLTAP09496 248 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 RAB40ALP0C0E4 278 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CISD3P0C7P0 127 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 MBL2P11226 248 aaPredicted RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 IL11P20809 199 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CYP3A5P20815 502 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 BDNFP23560 247 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 LMO2P25791 158 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 ACOT2P49753 483 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TAF6P49848 677 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 IRX1P78414 480 aaPredicted RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 ZNF415Q09FC8 603 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TAF10Q12962 218 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 BECN1Q14457 450 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TMEM132DQ14C87 1099 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CA9Q16790 459 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 KLHL26Q53HC5 615 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 XKR6Q5GH73 641 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 IL27RAQ6UWB1 636 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 ZNF497Q6ZNH5 498 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TPGS1Q6ZTW0 290 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 C1orf186Q6ZWK4 172 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 AVL9Q8NBF6 648 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TMEM178AQ8NBL3 297 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 MAPK1IP1LQ8NDC0 245 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TMEM161BQ8NDZ6 487 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CCDC26Q8TAB7 109 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 SAP25Q8TEE9 199 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 C2orf15Q8WU43 125 aaKnown RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 SNRNP27Q8WVK2 155 aaKnown RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 SYN2Q92777 582 aaPredicted RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 KIFAP3Q92845 792 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 MYLPFQ96A32 169 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 BIRC7Q96CA5 298 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 THOC1Q96FV9 657 aaKnown RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 POM121L2Q96KW2 1035 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 SEPHS2Q99611 448 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TUFT1Q9NNX1 390 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 SPHK2Q9NRA0 654 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 DDX19AQ9NUU7 478 aaKnown RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 DEC1Q9P2X7 70 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 UXTQ9UBK9 157 aaPredicted RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CPSF3Q9UKF6 684 aaKnown RBP3.21□□□□□ -1.9
CBWD1-229ENST00000620292 CLEC4EQ9ULY5 219 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 PADI2Q9Y2J8 665 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TMED3Q9Y3Q3 217 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 PCDHGA1Q9Y5H4 931 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 PRSS21Q9Y6M0 314 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 FAM169AQ9Y6X4 670 aa3.21□□□□□ -1.9
CBWD1-229ENST00000620292 TRPM6Q9BX84 2022 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 PTPRJQ12913 1337 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 IGKV3D-15A0A087WSY6 115 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 A0A1W2PPM1 405 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 ANKRD61A6NGH8 418 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 KPNA7A9QM74 516 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 F8VP50 259 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 ZNF195O14628 629 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 OGTO15294 1046 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 CLDN3O15551 220 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 SPRY1O43609 319 aaPredicted RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 CACNG3O60359 315 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 RTN2O75298 545 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 CSO75390 466 aaKnown RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 CDC123O75794 336 aaPredicted RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 IGLV3-19P01714 112 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 ADRB2P07550 413 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 FDPSP14324 419 aaKnown RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 RPA1P27694 616 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 CCT6AP40227 531 aaKnown RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 UQCRFS1P47985 274 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 ALDH3A2P51648 485 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 ZNF75DP51815 510 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 EVCP57679 992 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 SNRPD1P62314 119 aaKnown RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 TSPY1Q01534 308 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 SNTB1Q13884 538 aaKnown RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 IL11RAQ14626 422 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 PTPRCAPQ14761 206 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 TGIF1Q15583 401 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 IL17AQ16552 155 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 ODF4Q2M2E3 257 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 TMEM215Q68D42 235 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 PWWP2BQ6NUJ5 590 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 C11orf63Q6NUN7 778 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 BLOC1S2Q6QNY1 142 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 TRMT11Q7Z4G4 463 aaKnown RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 VASH2Q86V25 355 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 METTL23Q86XA0 190 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 ZC3H3Q8IXZ2 948 aaKnown RBP3.2□□□□□ -1.9
CBWD1-229ENST00000620292 KIRREL3Q8IZU9 778 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 THEM5Q8N1Q8 247 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 OR5AP2Q8NGF4 316 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 SCFD1Q8WVM8 642 aa3.2□□□□□ -1.9
CBWD1-229ENST00000620292 HTR3CQ8WXA8 447 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms