RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MARCH8Q5T0T0 291 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 SPOUT1Q5T280 376 aaKnown RBP9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 NLRC3Q7RTR2 1065 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 ADGRG3Q86Y34 549 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 KLBQ86Z14 1044 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 OR7G3Q8NG95 312 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 CSGALNACT1Q8TDX6 532 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 GEMIN6Q8WXD5 167 aaKnown RBP9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 FBXO32Q969P5 355 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 FCRL4Q96PJ5 515 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 RTP3Q9BQQ7 232 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 GINS4Q9BRT9 223 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 FUZQ9BT04 418 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 NTMT1Q9BV86 223 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 SLC32A1Q9H598 525 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZFP64Q9NPA5 681 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 KCTD5Q9NXV2 234 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 PRSS21Q9Y6M0 314 aa9.29□□□□□ -0.92
TNFAIP3-210ENST00000620204 GLYATL1P3A0A0U1RQE8 302 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 OR6C74A6NCV1 312 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PGRMC2O15173 223 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 YY2O15391 372 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 GABRB1P18505 474 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ACSL1P33121 698 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 SNTB2Q13425 540 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TCTE1Q5JU00 501 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ATXN7L2Q5T6C5 722 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TRIM40Q6P9F5 258 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 SCD5Q86SK9 330 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 GPR135Q8IZ08 494 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 RPLP0P6Q8NHW5 317 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZNF671Q8TAW3 534 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 C1orf74Q96LT6 269 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 SORCS2Q96PQ0 1159 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TAPBPLQ9BX59 468 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 KATNBL1Q9H079 304 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ELAC1Q9H777 363 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 MGAT4CQ9UBM8 478 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 VPS29Q9UBQ0 182 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZNF69Q9UC07 566 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 FLVCR2Q9UPI3 526 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TP53BP1Q12888 1972 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 HHLA1C9JL84 531 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PRKYO43930 277 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 RAB3AP20336 220 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 CD52P31358 61 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 RECQLP46063 649 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 MAP4K2Q12851 820 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PIN1Q13526 163 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 KCNC3Q14003 757 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 VEZF1Q14119 521 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 SWI5Q1ZZU3 235 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZNF628Q5EBL2 1059 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 GDF6Q6KF10 455 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ARL9Q6T311 187 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ESPNLQ6ZVH7 1005 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 LIX1LQ8IVB5 337 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZNF454Q8N9F8 522 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 OR4F15Q8NGB8 312 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TTTY10Q9BZA0 68 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZNF436Q9C0F3 470 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 DNAJC11Q9NVH1 559 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TRPC4Q9UBN4 977 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PRG3Q9Y2Y8 225 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 INPPL1O15357 1258 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PI15O43692 258 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 MTX2O75431 263 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PRAMEF12O95522 483 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 F2P00734 622 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 HLA-DPB1P04440 258 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 BPIP17213 487 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PTPN6P29350 595 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 CD79BP40259 229 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 MRPL19P49406 292 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 MC1RQ01726 317 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZNF169Q14929 603 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 PLK5Q496M5 336 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 RAB41Q5JT25 222 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ATRAIDQ6UW56 229 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 FAM198BQ6UWH4 519 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TRIM46Q7Z4K8 759 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 GPAT4Q86UL3 456 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 ZFP82Q8N141 532 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 TMEM86AQ8N2M4 240 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 CMTM7Q96FZ5 175 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 MSLNLQ96KJ4 702 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 SEPT5Q99719 369 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 P2RY13Q9BPV8 354 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 SLC6A17Q9H1V8 727 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 OSER1Q9NX31 292 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 WDR90Q96KV7 1748 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 SPTBP11277 2137 aa9.28□□□□□ -0.92
TNFAIP3-210ENST00000620204 GPR171O14626 319 aa9.27□□□□□ -0.92
TNFAIP3-210ENST00000620204 BET1O15155 118 aa9.27□□□□□ -0.92
TNFAIP3-210ENST00000620204 ATG12O94817 140 aa9.27□□□□□ -0.92
TNFAIP3-210ENST00000620204 BCHEP06276 602 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms