RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NPRL3Q12980 569 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TRAM2Q15035 370 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ARL6IP1Q15041 203 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ATP6AP1Q15904 470 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TSTD2Q5T7W7 516 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 FIGNL1Q6PIW4 674 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PRELID2Q8N945 189 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 OR9A1PQ8NGU1 263 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 COQ8BQ96D53 544 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ZNF416Q9BWM5 594 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 A1L4Q6 167 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 B4GALT5O43286 388 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 MSI1O43347 362 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 FCER2P06734 321 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 HK1P19367 917 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CDK7P50613 346 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PAFAH1B2P68402 229 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ARF5P84085 180 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 RAB11BQ15907 218 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 STRA8Q7Z7C7 330 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 OFCC1Q8IZS5 231 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 LRRC25Q8N386 305 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 ZSWIM2Q8NEG5 633 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TUBB1Q9H4B7 451 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 STEAP1Q9UHE8 339 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PCDHA7Q9UN72 937 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TPP1O14773 563 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 NR4A1P22736 598 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TNFSF8P32971 234 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GP5P40197 560 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GZMKP49863 264 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 DRG2P55039 364 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 NHLH1Q02575 133 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ZNF628Q5EBL2 1059 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 LAS2Q8IYD9 372 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SERHLQ9NQF3 203 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ATXN10Q9UBB4 475 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ENPP1P22413 925 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 MAP2K6P52564 334 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CDC42P60953 191 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ETFDHQ16134 617 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 KLHL12Q53G59 568 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 MARVELD2Q8N4S9 558 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CYSLTR2Q9NS75 346 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ACTR3BQ9P1U1 418 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 MAN1B1Q9UKM7 699 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 L1RE1Q9UN81 338 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SMAD7O15105 426 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 PPM1BO75688 479 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 EPHA1P21709 976 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GLP1RP43220 463 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 LIMK1P53667 647 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 RPL38P63173 70 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 ZNF273Q14593 569 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 FAM109AQ8N4B1 249 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CHCHD4Q8N4Q1 142 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 DHRSXQ8N5I4 330 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 METTL27Q8N6F8 245 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 OR4C6Q8NH72 309 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 C16orf58Q96GQ5 468 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PANX1Q96RD7 426 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TRNAU1APQ9NX07 287 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 ICKQ9UPZ9 632 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 STK16O75716 305 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 KDM4BO94953 1096 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SNRPAP09012 282 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 PCK1P35558 622 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ZFP69Q49AA0 526 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 BEND6Q5SZJ8 279 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 CHERPQ8IWX8 916 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 HAVCR2Q8TDQ0 301 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PWWP2AQ96N64 755 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TBX21Q9UL17 535 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SH3D21A4FU49 640 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 C12orf71A8MTZ7 269 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 WISP1O95388 367 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 FAM228BP0C875 321 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PNLIPP16233 465 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 NME5P56597 212 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 OTUD4Q01804 1114 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 MPP2Q14168 576 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PYHIN1Q6K0P9 492 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 KIAA0408Q6ZU52 694 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TAC4Q86UU9 113 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PARP8Q8N3A8 854 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SIMC1Q8NDZ2 872 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 FAM129BQ96TA1 746 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SLC25A51Q9H1U9 297 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 DNMT3BQ9UBC3 853 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 POMPQ9Y244 141 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 FAM237BA0A1B0GVD1 139 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CRYM-AS1A6NIL9 109 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 AQP7O14520 342 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PSMD10O75832 226 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 MAOAP21397 527 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CORO7P57737 925 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 MZT2AQ6P582 158 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 IL20RBQ6UXL0 311 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GTSCR1Q86UQ5 136 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms