RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 STRA6Q9BX79 667 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF436Q9C0F3 470 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 UNKLQ9H9P5 680 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 NMNAT1Q9HAN9 279 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 PNO1Q9NRX1 252 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 LOC105369274A0A096LPK9 316 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GXYLT2A0PJZ3 443 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 TTC34A8MYJ7 566 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GP1BBP13224 206 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 PTH2RP49190 550 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 PRMT2P55345 433 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF616Q08AN1 781 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GALEQ14376 348 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GK2Q14410 553 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ARHGAP11AQ6P4F7 1023 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GSG1LQ6UXU4 331 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 OR4N4Q8N0Y3 316 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 METTL4Q8N3J2 472 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 MAL2Q969L2 176 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GON4LQ3T8J9 2241 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 RHPN2P1A8MT19 583 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 GPR89AB7ZAQ6 455 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 EEF1E1-BLOC1S5C9J1V9 151 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 GPR89BP0CG08 455 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CD34P28906 385 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CDK10Q15131 360 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF691Q5VV52 312 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 NRROSQ86YC3 692 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 TP53INP2Q8IXH6 220 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 NUP43Q8NFH3 380 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 OR9Q2Q8NGE9 314 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 OR14K1Q8NGZ2 314 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 OR52P1PQ8NH57 321 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ARNTL2Q8WYA1 636 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 DPF3Q92784 378 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 FKBP10Q96AY3 582 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 TMEM19Q96HH6 336 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SLC5A7Q9GZV3 580 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 EPHA6Q9UF33 1036 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 DHDHQ9UQ10 334 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SSX5O60225 188 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 HNF1BP35680 557 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CASP3P42574 277 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 RPS5P46782 204 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 RPS26P62854 115 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 GRM2Q14416 872 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 POU4F3Q15319 338 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CHRFAM7AQ494W8 412 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 FLYWCH1Q4VC44 716 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 RAB41Q5JT25 222 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF783Q6ZMS7 281 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ANKK1Q8NFD2 765 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 B3GNT7Q8NFL0 401 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 OR7G1Q8NGA0 311 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 OR5T2Q8NGG2 359 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 HCAR2Q8TDS4 363 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF300Q96RE9 604 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 QPCTLQ9NXS2 382 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CNOT2Q9NZN8 540 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CD300AQ9UGN4 299 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 YARS2Q9Y2Z4 477 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 GRXCR1A8MXD5 290 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SLC22A5O76082 557 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SPDEFO95238 335 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 IL32P24001 234 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SOX3P41225 446 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 RGNQ15493 299 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 C3P1Q6ZMU1 363 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SIMC1Q8NDZ2 872 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 OR5H6Q8NGV6 325 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SMPDL3BQ92485 455 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CNN2Q99439 309 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 HEMK1Q9Y5R4 338 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 A0A1W2PQ45 241 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 A0A1W2PQY0 241 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ALDH3B2P48448 385 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 BLKP51451 505 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 TATDN3Q17R31 274 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 LETMD1Q6P1Q0 360 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF529Q6P280 563 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ENPP7Q6UWV6 458 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ARL14Q8N4G2 192 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 HUS1BQ8NHY5 278 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 SCGB1C1Q8TD33 95 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 THAP7Q9BT49 309 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 URM1Q9BTM9 101 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 ARHGAP39Q9C0H5 1083 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 RDH14Q9HBH5 336 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 PLAGL1Q9UM63 463 aa10.17□□□□□ -0.78
CLTCL1-209ENST00000617103 B8ZZF3 427 aa10.16□□□□□ -0.78
CLTCL1-209ENST00000617103 UBFD1O14562 309 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-209ENST00000617103 TSPAN6O43657 245 aa10.16□□□□□ -0.78
CLTCL1-209ENST00000617103 ALDOBP05062 364 aa10.16□□□□□ -0.78
CLTCL1-209ENST00000617103 ELNP15502 786 aa10.16□□□□□ -0.78
CLTCL1-209ENST00000617103 SSTR4P31391 388 aa10.16□□□□□ -0.78
CLTCL1-209ENST00000617103 CD68P34810 354 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-209ENST00000617103 HMGCLP35914 325 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms