RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PPP2R1BP30154 601 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 EMP2P54851 167 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 IRX1P78414 480 aaPredicted RBP13.86□□□□□ -0.19
UBXN1-218ENST00000616865 EEF1A2Q05639 463 aaKnown RBP13.86□□□□□ -0.19
UBXN1-218ENST00000616865 STX4Q12846 297 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 GKAP1Q5VSY0 366 aaPredicted RBP13.86□□□□□ -0.19
UBXN1-218ENST00000616865 METTL21CQ5VZV1 264 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 FAM71E1Q6IPT2 247 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 GFRALQ6UXV0 394 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 RIPOR1Q6ZS17 1223 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 LAPTM4BQ86VI4 370 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 MIER2Q8N344 545 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 C10orf82Q8WW14 230 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 METTL21AQ8WXB1 218 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 HAS2Q92819 552 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 TANKQ92844 425 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 CCDC120Q96HB5 630 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 EGLN2Q96KS0 407 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 MRGBPQ9NV56 204 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 PLA2G3Q9NZ20 509 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 HEY2Q9UBP5 337 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 SUCOQ9UBS9 1254 aaKnown RBP13.86□□□□□ -0.19
UBXN1-218ENST00000616865 PCDHA9Q9Y5H5 950 aa13.86□□□□□ -0.19
UBXN1-218ENST00000616865 PDZD2O15018 2839 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 CYR61O00622 381 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 NDUFAB1O14561 156 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 PGRMC2O15173 223 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 PRKRAO75569 313 aaKnown RBP13.85□□□□□ -0.19
UBXN1-218ENST00000616865 ERAL1O75616 437 aaKnown RBP13.85□□□□□ -0.19
UBXN1-218ENST00000616865 F10P00742 488 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 CELA2AP08217 269 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 COX7A2P14406 83 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 DDCP20711 480 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 PTGER4P35408 488 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 CLNS1AP54105 237 aaKnown RBP13.85□□□□□ -0.19
UBXN1-218ENST00000616865 CLDN8P56748 225 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 SQLEQ14534 574 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 PTGR1Q14914 329 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 GDF7Q7Z4P5 450 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 CLNKQ7Z7G1 428 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 OR4K14Q8NGD5 310 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 PPCDCQ96CD2 204 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 KLHL29Q96CT2 875 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 PTCHD1Q96NR3 888 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 REEP4Q9H6H4 257 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 PRDM9Q9NQV7 894 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 SH3BP4Q9P0V3 963 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 ARL2BPQ9Y2Y0 163 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 MMACHCQ9Y4U1 282 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 ZNF780BQ9Y6R6 833 aa13.85□□□□□ -0.19
UBXN1-218ENST00000616865 AKAP9Q99996 3911 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 TRGV8A0A0C4DH27 118 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 CCDC22O60826 627 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 CTNSO60931 367 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 SLC22A3O75751 556 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 UNC5CO95185 931 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 HSD17B7P56937 341 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 PGS1Q32NB8 556 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 PDCD4Q53EL6 469 aaKnown RBP13.84□□□□□ -0.19
UBXN1-218ENST00000616865 FAAH2Q6GMR7 532 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 BNC2Q6ZN30 1099 aaPredicted RBP13.84□□□□□ -0.19
UBXN1-218ENST00000616865 QSOX2Q6ZRP7 698 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 MRGPRGQ86SM5 289 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 SAMD14Q8IZD0 417 aaPredicted RBP13.84□□□□□ -0.19
UBXN1-218ENST00000616865 MMP21Q8N119 569 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 ZNF808Q8N4W9 903 aaPredicted RBP13.84□□□□□ -0.19
UBXN1-218ENST00000616865 C7orf57Q8NEG2 295 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 BCAS4Q8TDM0 211 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
UBXN1-218ENST00000616865 MTERF3Q96E29 417 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 BBS4Q96RK4 519 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 BRINP2Q9C0B6 783 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 VN1R1Q9GZP7 353 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 RNF32Q9H0A6 362 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBXN1-218ENST00000616865 LANCL2Q9NS86 450 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 ATAD3AQ9NVI7 634 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 EHD3Q9NZN3 535 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 ABI3Q9P2A4 366 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 UTS2RQ9UKP6 389 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 GPR45Q9Y5Y3 372 aa13.84□□□□□ -0.19
UBXN1-218ENST00000616865 LOC102723996A0A087X1L8 192 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 SYNDIG1LA6NDD5 238 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 CCL21O00585 134 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 SCAMP2O15127 329 aaKnown RBP13.83□□□□□ -0.2
UBXN1-218ENST00000616865 OR10H2O60403 315 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 LDB3O75112 727 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 RASAL1O95294 804 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 GPR75O95800 540 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 WDPCPO95876 746 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 CRYABP02511 175 aaKnown RBP13.83□□□□□ -0.2
UBXN1-218ENST00000616865 IFNA16P05015 189 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 ITGAMP11215 1152 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 MAOAP21397 527 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 MST1P26927 711 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 NTSP30990 170 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 CA7P43166 264 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 ATP4BP51164 291 aa13.83□□□□□ -0.2
UBXN1-218ENST00000616865 HNRNPFP52597 415 aaKnown RBP13.83□□□□□ -0.2
UBXN1-218ENST00000616865 BTG2P78543 158 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms