RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 LALBAP00709 142 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 CD3GP09693 182 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 RD3LP0DJH9 198 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 HOXB6P17509 224 aaKnown RBP12.48□□□□□ -0.41
MSH6-214ENST00000616033 OR1D2P34982 312 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 ERVK-21P61565 698 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 RAE1P78406 368 aaKnown RBP12.48□□□□□ -0.41
MSH6-214ENST00000616033 KLHL22Q53GT1 634 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 KIAA1324Q6UXG2 1013 aaKnown RBP12.48□□□□□ -0.41
MSH6-214ENST00000616033 WASH2PQ6VEQ5 465 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 LUZP2Q86TE4 346 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 LAS2Q8IYD9 372 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 TCTE3Q8IZS6 198 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 SAMD12Q8N8I0 201 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 OR11H4Q8NGC9 324 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 OR5D16Q8NGK9 328 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 BBS10Q8TAM1 723 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 SLC7A13Q8TCU3 470 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 AP3S1Q92572 193 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 UFD1Q92890 307 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 NEIL2Q969S2 332 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 EXOSC8Q96B26 276 aaKnown RBP12.48□□□□□ -0.41
MSH6-214ENST00000616033 SLC22A12Q96S37 553 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 QRSL1Q9H0R6 528 aaKnown RBP12.48□□□□□ -0.41
MSH6-214ENST00000616033 CNIH4Q9P003 139 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 HCN2Q9UL51 889 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 PATJQ8NI35 1801 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 IQCMA0A1B0GVH7 501 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 SLC28A2O43868 658 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 MPZL2O60487 215 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 RFPL3O75679 317 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 IGHA2P01877 340 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 EPHX1P07099 455 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 H1F0P07305 194 aaKnown RBP12.48□□□□□ -0.41
MSH6-214ENST00000616033 LHCGRP22888 699 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 KCNA10Q16322 511 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 ADGRF1Q5T601 910 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 MLIPQ5VWP3 458 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 ZNF730Q6ZMV8 503 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 CREB3L2Q70SY1 520 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 COMMD6Q7Z4G1 85 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 KLBQ86Z14 1044 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
MSH6-214ENST00000616033 TTLQ8NG68 377 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 FATE1Q969F0 183 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 RBCK1Q9BYM8 510 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 ENAMQ9NRM1 1142 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 CDH23Q9H251 3354 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 SHISA3A0PJX4 238 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 LGALS8O00214 317 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 HYAL3O43820 417 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 RAB36O95755 333 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 IFNA14P01570 189 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 IL3P08700 152 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ZNF8P17098 575 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 CCND3P30281 292 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 OPRD1P41143 372 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 CTSOP43234 321 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 CCR6P51684 374 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 RAB14P61106 215 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 CLLU1OSQ5K130 101 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ZBTB37Q5TC79 503 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 CRTC1Q6UUV9 634 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 KANSL1Q7Z3B3 1105 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 ZNF655Q8N720 491 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 UXS1Q8NBZ7 420 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ASB11Q8WXH4 323 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 TMEM19Q96HH6 336 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 HYLS1Q96M11 299 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.47□□□□□ -0.411e-8■■■■□ 21.4
MSH6-214ENST00000616033 KLHL21Q9UJP4 597 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 MYOFQ9NZM1 2061 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ARHGEF33A8MVX0 844 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ZNF197O14709 1029 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 SGTAO43765 313 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 GATBO75879 557 aaKnown RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 IL1AP01583 271 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 OR12D1P0DN82 309 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 RHCEP18577 417 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 HLA-DMAP28067 261 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 LIMK1P53667 647 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 MANFP55145 182 aaKnown RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 CNTN1Q12860 1018 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 MLLT11Q13015 90 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 GPR176Q14439 515 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 TMEM65Q6PI78 240 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ESPNLQ6ZVH7 1005 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 IZUMO1Q8IYV9 350 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 PROKR2Q8NFJ6 384 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 OR8J1Q8NGP2 316 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 SMAP2Q8WU79 429 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 BTN2A2Q8WVV5 523 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 CLP1Q92989 425 aaKnown RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 ARSGQ96EG1 525 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 SLC12A9Q9BXP2 914 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 NLNQ9BYT8 704 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms