RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 HMGN2P46Q86SG4 172 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SLC22A9Q8IVM8 553 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM156Q8N614 296 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 OR52R1Q8NGF1 315 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 NPAS1Q99742 590 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SLX1AQ9BQ83 275 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 UTP23Q9BRU9 249 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 YIPF4Q9BSR8 244 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 FBXO34Q9NWN3 711 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 PPT2Q9UMR5 302 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 VPS4AQ9UN37 437 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TSC22D4Q9Y3Q8 395 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 MMACHCQ9Y4U1 282 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ZFHX3Q15911 3703 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TEP1Q99973 2627 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 AKAP9Q99996 3911 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TIA1P31483 386 aaKnown RBP eCLIP5.26□□□□□ -1.579e-7■□□□□ 9.5
CPNE3-208ENST00000614678 HPDP32754 393 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 BUD31P41223 144 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 MC3RP41968 323 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CYB561P49447 251 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 MEOX1P50221 254 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 PLIN5Q00G26 463 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ACSM2AQ08AH3 577 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 C2orf80Q0P641 193 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 GLIPR1L2Q4G1C9 344 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ACSM2BQ68CK6 577 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ZAR1Q86SH2 424 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ST13P4Q8IZP2 240 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ADIPOR1Q96A54 375 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 VMP1Q96GC9 406 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 WWTR1Q9GZV5 400 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 WDR55Q9H6Y2 383 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SLCO1B3Q9NPD5 702 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 OLAHQ9NV23 265 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 G3BP2Q9UN86 482 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 PPIEQ9UNP9 301 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CCDC168Q8NDH2 2452 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 PRAMEF2O60811 474 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 RASAL1O95294 804 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 MLYCDO95822 493 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 DHRS4L1P0CG22 281 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ENDOUP21128 410 aaKnown RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 PIK3R1P27986 724 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 MAGEA5P43359 124 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 EMDP50402 254 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 CDK9P50750 372 aaKnown RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 BST1Q10588 318 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 HSPB3Q12988 150 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 FNDC7Q5VTL7 733 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM198Q66K66 360 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 NUDCD3Q8IVD9 361 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 SLC5A8Q8N695 610 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 PSD4Q8NDX1 1056 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 OR4K14Q8NGD5 310 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 NR4A3Q92570 626 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF524Q96C55 264 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 JSRP1Q96MG2 331 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 NUF2Q9BZD4 464 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 IQCGQ9H095 443 aaKnown RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 OR10A5Q9H207 317 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 EQTNQ9NQ60 294 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 BCAP29Q9UHQ4 241 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 CRCPO75575 148 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 KRT6AP02538 564 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 KRT6BP04259 564 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 IL10P22301 178 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 RFX3P48380 749 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 KRT6CP48668 564 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 CMPK2Q5EBM0 449 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 TRIM46Q7Z4K8 759 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 SPPL2CQ8IUH8 684 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 FAM13CQ8NE31 585 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 SRFBP1Q8NEF9 429 aaKnown RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 OR5M9Q8NGP3 310 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 EFHD2Q96C19 240 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 REPS1Q96D71 796 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 SCMH1Q96GD3 660 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF354BQ96LW1 612 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 GNRHR2Q96P88 292 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 NODALQ96S42 347 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM109Q9BVC6 243 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 GLIPR2Q9H4G4 154 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 MRPS33Q9Y291 106 aaKnown RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 CHCHD2Q9Y6H1 151 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 KCNE3Q9Y6H6 103 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 PDZD2O15018 2839 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 A0A1B0GTH9 108 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ZFAND5O76080 213 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 LAMP1P11279 417 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 BCKDHAP12694 445 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ICAM2P13598 275 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 PORP16435 677 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 GRNP28799 593 aaKnown RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 RPS26P62854 115 aaKnown RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 PHC1P78364 1004 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 FOXO1Q12778 655 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 RCN2Q14257 317 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 IMPG1Q17R60 797 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 FAM71E1Q6IPT2 247 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms