RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 WFIKKN1Q96NZ8 548 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SPON2Q9BUD6 331 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FBRSQ9HAH7 460 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 C1orf167Q5SNV9 1468 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CACNG3O60359 315 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 OR2F2O95006 317 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ETV4P43268 484 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NUMBP49757 651 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 OR2F1Q13607 317 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 USP51Q70EK9 711 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SLC35D2Q76EJ3 337 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PARGQ86W56 976 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 AHCYL2Q96HN2 611 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GORASP2Q9H8Y8 452 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FLRT1Q9NZU1 646 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 KLHL9Q9P2J3 617 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 WIF1Q9Y5W5 379 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 HTR2CP28335 458 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 UPP1Q16831 310 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 COL5A1-AS1Q5SY13 56 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 IL34Q6ZMJ4 242 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF783Q6ZMS7 281 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 VNN3Q9NY84 501 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 OR2A25A4D2G3 310 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GJE1A6NN92 205 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FMO6PO60774 539 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CST2P09228 141 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RNH1P13489 461 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF10P21506 573 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ADORA2BP29275 332 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CLCN7P51798 805 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF484Q5JVG2 852 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TXNRD3Q86VQ6 643 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ANKRD46Q86W74 232 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FSTL5Q8N475 847 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 COMMD1Q8N668 190 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 BEND7Q8N7W2 519 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 POC1BQ8TC44 478 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SELENOMQ8WWX9 145 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CMBLQ96DG6 245 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 C7orf34Q96L11 122 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FAM126AQ9BYI3 521 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SLCO1B1Q9Y6L6 691 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PTP4A3O75365 173 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NR2F1P10589 423 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 INCA1Q0VD86 236 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PMPCAQ10713 525 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 OR2B11Q5JQS5 317 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CES4AQ5XG92 561 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 DOK6Q6PKX4 331 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 AQP11Q8NBQ7 271 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 OR5M8Q8NGP6 311 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 LMAN1LQ9HAT1 526 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NMRK2Q9NPI5 230 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SOHLH2Q9NX45 425 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 E7ESA3 106 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ESR1P03372 595 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF41P51814 821 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TAS2R60P59551 318 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RPP30P78346 268 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 DUSP4Q13115 394 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RPTNQ6XPR3 784 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 KLHDC1Q8N7A1 406 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SLC29A3Q9BZD2 475 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TSPAN10Q9H1Z9 355 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TFB2MQ9H5Q4 396 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 MRPS30Q9NP92 439 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NOCTQ9UK39 431 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TRABD2BA6NFA1 517 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 J3KR12 359 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ANKRD28O15084 1053 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TRBC1P01850 177 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CSF1P09603 554 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RD3LP0DJH9 198 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GGT1P19440 569 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 IDH3GP51553 393 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ADARB1P78563 741 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 DCAF4L1Q3SXM0 396 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM69Q5SWH9 247 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 LYPLAL1Q5VWZ2 237 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 OR2T2Q6IF00 324 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NPAS3Q8IXF0 933 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SHKBP1Q8TBC3 707 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 MFSD14AQ96MC6 490 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 HRH4Q9H3N8 390 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GSKIPQ9P0R6 139 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 A0A0A6YYJ9 748 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 LAP3P28838 519 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PCSK1P29120 753 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF155Q12901 538 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CBFBQ13951 182 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 XKR3Q5GH77 459 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SWSAP1Q6NVH7 229 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ARL9Q6T311 187 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SUCNR1Q9BXA5 334 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SLC6A20Q9NP91 592 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PLSCR3Q9NRY6 295 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FEM1BQ9UK73 627 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RALGAPA2Q2PPJ7 1873 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SLC15A5A6NIM6 579 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms