RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 C15orf38-AP3S2A0A0A6YYH1 394 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 AHRRA9YTQ3 701 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 SNX4O95219 450 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 HPNP05981 417 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 RBP1P09455 135 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 CT62P0C5K7 136 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 PEX19P40855 299 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 XKP51811 444 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 ART1P52961 327 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 NRG3P56975 720 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 BICRALQ6AI39 1079 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 PAGE2Q7Z2X7 111 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 C17orf47Q8NEP4 570 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 ISL2Q96A47 359 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 PHF21BQ96EK2 531 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 RILPQ96NA2 401 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 ANGPTL4Q9BY76 406 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 OR10A5Q9H207 317 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 UBQLN3Q9H347 655 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 ZNF358Q9NW07 568 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 AHSPQ9NZD4 102 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 NINJ2Q9NZG7 142 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 PCTPQ9UKL6 214 aa16.29■□□□□ 0.2
SSBP1-215ENST00000612337 EXPH5Q8NEV8 1989 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 STX16-NPEPL1H3BU86 382 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 SYT5O00445 386 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 STX16O14662 325 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 CTAG2O75638 210 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 TRAPPC6AO75865 159 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 EPPINO95925 133 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 KLK1P06870 262 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 CPMP14384 443 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 CEACAM8P31997 349 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-215ENST00000612337 MAGEA12P43365 314 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 KIR2DL3P43628 341 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 CDK9P50750 372 aaKnown RBP16.28■□□□□ 0.2
SSBP1-215ENST00000612337 RPP38P78345 283 aaKnown RBP16.28■□□□□ 0.2
SSBP1-215ENST00000612337 CRYZQ08257 329 aaKnown RBP16.28■□□□□ 0.2
SSBP1-215ENST00000612337 IFT88Q13099 833 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 TRAF3Q13114 568 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 ACSF3Q4G176 576 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-215ENST00000612337 C6orf163Q5TEZ5 329 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 FNDC7Q5VTL7 733 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 C8orf74Q6P047 294 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 PACS2Q86VP3 889 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 RELL2Q8NC24 303 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-215ENST00000612337 OR7G1Q8NGA0 311 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 NRGNQ92686 78 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 TIMP4Q99727 224 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 PRDM14Q9GZV8 571 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 ZBTB26Q9HCK0 441 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 DNAJB12Q9NXW2 375 aaKnown RBP16.28■□□□□ 0.2
SSBP1-215ENST00000612337 C15orf41Q9Y2V0 281 aa16.28■□□□□ 0.2
SSBP1-215ENST00000612337 DVL2O14641 736 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 SMIM24O75264 130 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 PORP16435 677 aaPredicted RBP16.27■□□□□ 0.2
SSBP1-215ENST00000612337 NT5EP21589 574 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 ABCD3P28288 659 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 TIMP3P35625 211 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 CASP3P42574 277 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 MASP1P48740 699 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 GGTA1PQ4G0N0 100 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 CCNYL2Q5T2Q4 361 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 UBAP2Q5T6F2 1119 aaKnown RBP16.27■□□□□ 0.2
SSBP1-215ENST00000612337 TTC19Q6DKK2 380 aaPredicted RBP16.27■□□□□ 0.2
SSBP1-215ENST00000612337 RELL1Q8IUW5 271 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 LACC1Q8IV20 430 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 ZZZ3Q8IYH5 903 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 PM20D2Q8IYS1 436 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 METTL4Q8N3J2 472 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 NAXEQ8NCW5 288 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 TNIP2Q8NFZ5 429 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 SLC44A1Q8WWI5 657 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 NINJ1Q92982 152 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 NSUN5Q96P11 429 aaKnown RBP16.27■□□□□ 0.2
SSBP1-215ENST00000612337 LRRC1Q9BTT6 524 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 MRPL1Q9BYD6 325 aaKnown RBP16.27■□□□□ 0.2
SSBP1-215ENST00000612337 XPR1Q9UBH6 696 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 CES1P1Q9UKY3 287 aa16.27■□□□□ 0.2
SSBP1-215ENST00000612337 KDM4EB2RXH2 506 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-215ENST00000612337 CDH16O75309 829 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 ACSL3O95573 720 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 INHBAP08476 426 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 S1PR1P21453 382 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 BMP5P22003 454 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 GPX3P22352 226 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 UQCRC1P31930 480 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 ASCL1P50553 236 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 IST1P53990 364 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 CKAP4Q07065 602 aaKnown RBP16.26■□□□□ 0.19
SSBP1-215ENST00000612337 SNTB1Q13884 538 aaKnown RBP16.26■□□□□ 0.19
SSBP1-215ENST00000612337 SF3B4Q15427 424 aaKnown RBP eCLIP16.26■□□□□ 0.195e-6■■□□□ 12.9
SSBP1-215ENST00000612337 TSNAXIP1Q2TAA8 658 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 FBXL19-AS1Q494R0 122 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 NHSL2Q5HYW2 709 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 VASNQ6EMK4 673 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 PRR22Q8IZ63 422 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 TRPC4APQ8TEL6 797 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 NTNG2Q96CW9 530 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms