RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CLDN1O95832 211 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 P04436 131 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 STSP08842 583 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 LINC00032P0C843 101 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 CSNK2A2P19784 350 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-204ENST00000608295 ZNF763Q0D2J5 394 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 DUSP8Q13202 625 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 PIGGQ5H8A4 983 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 CEP85LQ5SZL2 805 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 BICRALQ6AI39 1079 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 CCDC116Q8IYX3 515 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 OR52N2Q8NGI0 321 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 OR9A2Q8NGT5 310 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 CLHC1Q8NHS4 586 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 C16orf52Q8NHV5 167 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 NUBPLQ8TB37 319 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 GFM2Q969S9 779 aaKnown RBP13.37□□□□□ -0.27
HDDC2-204ENST00000608295 SPACA9Q96E40 222 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-204ENST00000608295 SACM1LQ9NTJ5 587 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 SENP1Q9P0U3 644 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 TNFRSF10DQ9UBN6 386 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 ENTPD4Q9Y227 616 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 LIPGQ9Y5X9 500 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 ZNF780BQ9Y6R6 833 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 GTF3C1Q12789 2109 aa13.37□□□□□ -0.27
HDDC2-204ENST00000608295 NINQ8N4C6 2090 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 A0A1B0GTH9 108 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 ACOT7O00154 380 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 AZIN1O14977 448 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
HDDC2-204ENST00000608295 TPOP07202 933 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 UROSP10746 265 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 GPX3P22352 226 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 PER3P56645 1201 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 FBXW4P57775 412 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 RPL38P63173 70 aaKnown RBP13.36□□□□□ -0.27
HDDC2-204ENST00000608295 KCNJ2P63252 427 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 C2orf80Q0P641 193 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 PRSS53Q2L4Q9 553 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 PRICKLE4Q2TBC4 344 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 GALNTL6Q49A17 601 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 TRMT12Q53H54 448 aaKnown RBP13.36□□□□□ -0.27
HDDC2-204ENST00000608295 CMPK2Q5EBM0 449 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 SH2D4BQ5SQS7 431 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 DESI1Q6ICB0 168 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 ANKRD26P1Q6NSI1 321 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 LYPD8Q6UX82 237 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 FGD2Q7Z6J4 655 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 GPALPP1Q8IXQ4 340 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 CNPY4Q8N129 248 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 GHDCQ8N2G8 530 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 MREGQ8N565 214 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 OR52R1Q8NGF1 315 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 OR2T11Q8NH01 316 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 ZIM3Q96PE6 472 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 TTTY12Q9BZ98 90 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
HDDC2-204ENST00000608295 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
HDDC2-204ENST00000608295 MIEF1Q9NQG6 463 aa13.36□□□□□ -0.27
HDDC2-204ENST00000608295 RRAGDQ9NQL2 400 aaPredicted RBP13.36□□□□□ -0.27
HDDC2-204ENST00000608295 TUBA8Q9NY65 449 aaPredicted RBP13.36□□□□□ -0.27
HDDC2-204ENST00000608295 ATP6AP2A0A1C7CYW4 349 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 OR6C76A6NM76 312 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 SEC22BO75396 215 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 ATP6AP2O75787 350 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 JUNP05412 331 aaKnown RBP13.35□□□□□ -0.27
HDDC2-204ENST00000608295 CELA3AP09093 270 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 GP1BBP13224 206 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 TACR1P25103 407 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 ARRB2P32121 409 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 CA7P43166 264 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 MAGEA5P43359 124 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 CASP6P55212 293 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 PPIAP62937 165 aaKnown RBP13.35□□□□□ -0.27
HDDC2-204ENST00000608295 TRA2BP62995 288 aaKnown RBP13.35□□□□□ -0.27
HDDC2-204ENST00000608295 BIKQ13323 160 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 MPEG1Q2M385 716 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 ZNF791Q3KP31 576 aaPredicted RBP13.35□□□□□ -0.27
HDDC2-204ENST00000608295 ARL13AQ5H913 290 aaPredicted RBP13.35□□□□□ -0.27
HDDC2-204ENST00000608295 GK5Q6ZS86 529 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 CD163Q86VB7 1156 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 TICAM1Q8IUC6 712 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 ZNF615Q8N8J6 731 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 PPP1R14CQ8TAE6 165 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 TWIST2Q8WVJ9 160 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 CCDC120Q96HB5 630 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 EGLN2Q96KS0 407 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 PPP1R36Q96LQ0 422 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 TSSK3Q96PN8 268 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 FAM173AQ9BQD7 235 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 NXF5Q9H1B4 397 aaKnown RBP13.35□□□□□ -0.27
HDDC2-204ENST00000608295 TUBB1Q9H4B7 451 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 GIMAP4Q9NUV9 329 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 RAB21Q9UL25 225 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 PSME2Q9UL46 239 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 DNAJC13O75165 2243 aa13.35□□□□□ -0.27
HDDC2-204ENST00000608295 PIP5K1BO14986 540 aa13.34□□□□□ -0.27
HDDC2-204ENST00000608295 AKAP10O43572 662 aa13.34□□□□□ -0.27
HDDC2-204ENST00000608295 LYPLA1O75608 230 aaPredicted RBP13.34□□□□□ -0.27
HDDC2-204ENST00000608295 RSL1D1O76021 490 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms