RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 DUSP2Q05923 314 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 MGAT2Q10469 447 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 TLR1Q15399 786 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 LTB4RQ15722 352 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 GSTA3Q16772 222 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 MPEG1Q2M385 716 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 HLA-DQA1Q5Y7H0 255 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 FAM111BQ6SJ93 734 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 MAVSQ7Z434 540 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 BEST3Q8N1M1 668 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 DOK4Q8TEW6 326 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 COQ8BQ96D53 544 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 AMDHD1Q96NU7 426 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 NPAS2Q99743 824 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 BHLHE41Q9C0J9 482 aaPredicted RBP13.24□□□□□ -0.29
CTSA-219ENST00000607841 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTSA-219ENST00000607841 GLIPR2Q9H4G4 154 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 AIG1Q9NVV5 245 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 ZNF639Q9UID6 485 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 ANAPC2Q9UJX6 822 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 B3GNT3Q9Y2A9 372 aa13.24□□□□□ -0.29
CTSA-219ENST00000607841 A0A087WV62 115 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 C2orf92A0A1B0GVN3 265 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 PLOD2O00469 737 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 UBDO15205 165 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 PRKNO60260 465 aaPredicted RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 PLOD3O60568 738 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 ITGA10O75578 1167 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 VIMP08670 466 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 IFI6P09912 130 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 S1PR1P21453 382 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 TRHRP34981 398 aaPredicted RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 GPC1P35052 558 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 CYB561P49447 251 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 IDH3AP50213 366 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 SSR4P51571 173 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 MRPS35P82673 323 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 OC90Q02509 493 aaPredicted RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 SRSF11Q05519 484 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 MLC1Q15049 377 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 EBPQ15125 230 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 PRSS53Q2L4Q9 553 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 DPY19L1Q2PZI1 675 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 LSM12Q3MHD2 195 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 TRMT12Q53H54 448 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 Q6ZS92 163 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 CAMKMTQ7Z624 323 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 PTRH1Q86Y79 214 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 RIMKLAQ8IXN7 391 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 C9orf40Q8IXQ3 194 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 GPALPP1Q8IXQ4 340 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 TMEM156Q8N614 296 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 KRTCAP2Q8N6L1 136 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 RBMXL3Q8N7X1 1067 aaKnown RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 ZNF615Q8N8J6 731 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 OR7A2PQ8NGA2 310 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 OR52R1Q8NGF1 315 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 SLC22A8Q8TCC7 542 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 STON2Q8WXE9 905 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 TP53INP1Q96A56 240 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 PNPLA2Q96AD5 504 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 CIDECQ96AQ7 238 aaPredicted RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 OR52B2Q96RD2 323 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 GAL3ST4Q96RP7 486 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 ZBTB18Q99592 522 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 CCDC28BQ9BUN5 200 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 TCF7L2Q9NQB0 619 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 PLA2G3Q9NZ20 509 aa13.23□□□□□ -0.29
CTSA-219ENST00000607841 HEMK1Q9Y5R4 338 aaPredicted RBP13.23□□□□□ -0.29
CTSA-219ENST00000607841 TRAV17A0A0B4J275 112 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 A0A1W2PRB8 838 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 TMEM200CA6NKL6 621 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 WWP2O00308 870 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 MAN1A2O60476 641 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 COQ9O75208 318 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 OR2J2O76002 312 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 CLPSP04118 112 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 ALDOCP09972 364 aaKnown RBP13.22□□□□□ -0.29
CTSA-219ENST00000607841 TROVE2P10155 538 aaKnown RBP eCLIP13.22□□□□□ -0.29
CTSA-219ENST00000607841 LAMP1P11279 417 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 PTGER1P34995 402 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 CD96P40200 585 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 FRKP42685 505 aaPredicted RBP13.22□□□□□ -0.29
CTSA-219ENST00000607841 TNFSF10P50591 281 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 HLCSP50747 726 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 DCAF7P61962 342 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 TUBA3CQ13748 450 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 PGS1Q32NB8 556 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 ZNF385BQ569K4 471 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 TUBA3EQ6PEY2 450 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 OPN5Q6U736 354 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 TMEM107Q6UX40 140 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 TAGAPQ8N103 731 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 SLC15A4Q8N697 577 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
CTSA-219ENST00000607841 C17orf47Q8NEP4 570 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 VPS37AQ8NEZ2 397 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
CTSA-219ENST00000607841 ASB15Q8WXK1 588 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms