RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PACRGLQ8N7B6 248 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 LZICQ8WZA0 190 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 GIMAP5Q96F15 307 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 C16orf58Q96GQ5 468 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 YIPF4Q9BSR8 244 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 ANKRA2Q9H9E1 313 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 C8orf4Q9NR00 106 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 FGF21Q9NSA1 209 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 TMEM184BQ9Y519 407 aaPredicted RBP20.24■□□□□ 0.83
USP6NL-204ENST00000606752 CLDN4O14493 209 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 ACOX3O15254 700 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 CTNSO60931 367 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 SLC35E2P0CK97 266 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 KCNJ10P78508 379 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 SYT16Q17RD7 645 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 TTLL10Q6ZVT0 673 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 CBR4Q8N4T8 237 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 IFI44Q8TCB0 444 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 FANCEQ9HB96 536 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 RAB23Q9ULC3 237 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 AK5Q9Y6K8 562 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 A0A087WV62 115 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 MYOCOSA0A1B0GUC4 107 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 PDLIM1O00151 329 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 SOCS2O14508 198 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 GNGT2O14610 69 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF749O43361 778 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 SLC28A2O43868 658 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 BMP10O95393 424 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 OPN1SWP03999 348 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 FABP3P05413 133 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 IFI6P09912 130 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 UQCRBP14927 111 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 NT5EP21589 574 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 GCGRP47871 477 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 HSPA13P48723 471 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 ZC3H14Q6PJT7 736 aaKnown RBP20.23■□□□□ 0.83
USP6NL-204ENST00000606752 LGI4Q8N135 537 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 METTL27Q8N6F8 245 aaPredicted RBP20.23■□□□□ 0.83
USP6NL-204ENST00000606752 OR51Q1Q8NH59 317 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF675Q8TD23 568 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 TMBIM1Q969X1 311 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF501Q96CX3 271 aaPredicted RBP20.23■□□□□ 0.83
USP6NL-204ENST00000606752 MS4A4EQ96PG1 132 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 NDC1Q9BTX1 674 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 ACTRT3Q9BYD9 372 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 RBCK1Q9BYM8 510 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF639Q9UID6 485 aa20.23■□□□□ 0.83
USP6NL-204ENST00000606752 C19orf53Q9UNZ5 99 aaPredicted RBP20.23■□□□□ 0.83
USP6NL-204ENST00000606752 PRAMEF27A3QJZ7 478 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 ASNA1O43681 348 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 PLOD3O60568 738 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 PDE9AO76083 593 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 RPSAP08865 295 aaKnown RBP20.22■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF883P0CG24 379 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 NR2F1P10589 423 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF23P17027 643 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 ALAS2P22557 587 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 SOX18P35713 384 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 MAN2A2P49641 1150 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 ARSFP54793 590 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 SLC13A2Q13183 592 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 GNA13Q14344 377 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 SYPL1Q16563 259 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 PRICKLE4Q2TBC4 344 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 TRMT12Q53H54 448 aaKnown RBP20.22■□□□□ 0.83
USP6NL-204ENST00000606752 FHL5Q5TD97 284 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 YOD1Q5VVQ6 348 aaPredicted RBP20.22■□□□□ 0.83
USP6NL-204ENST00000606752 FAM111BQ6SJ93 734 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 PIWIL3Q7Z3Z3 882 aaKnown RBP20.22■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF597Q96LX8 424 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 OR7D2Q96RA2 312 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 EQTNQ9NQ60 294 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 PRTFDC1Q9NRG1 225 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 BAG5Q9UL15 447 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 CDC14AQ9UNH5 594 aa20.22■□□□□ 0.83
USP6NL-204ENST00000606752 VPS13AQ96RL7 3174 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 IGHV5-10-1A0A0J9YXX1 117 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 VLDLRP98155 873 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 ERV3-1Q14264 604 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 CLPPQ16740 277 aaPredicted RBP20.21■□□□□ 0.83
USP6NL-204ENST00000606752 RPS26P11Q5JNZ5 115 aaPredicted RBP20.21■□□□□ 0.83
USP6NL-204ENST00000606752 TCEAL6Q6IPX3 200 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 TCEAL3Q969E4 200 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 C7orf34Q96L11 122 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 NDOR1Q9UHB4 597 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 MAU2Q9Y6X3 613 aa20.21■□□□□ 0.83
USP6NL-204ENST00000606752 DUXAA6NLW8 204 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 RASAL1O95294 804 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 ACY1Q03154 408 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 MGAT2Q10469 447 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 STX4Q12846 297 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 PRAMEF17Q5VTA0 474 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 MFSD12Q6NUT3 480 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 ARMC8Q8IUR7 673 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 CTHRC1Q96CG8 243 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 OTUB1Q96FW1 271 aaPredicted RBP20.2■□□□□ 0.82
USP6NL-204ENST00000606752 ZNF607Q96SK3 696 aa20.2■□□□□ 0.82
USP6NL-204ENST00000606752 TREX2Q9BQ50 279 aaPredicted RBP20.2■□□□□ 0.82
USP6NL-204ENST00000606752 SYNDIG1Q9H7V2 258 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms