RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TRIM46Q7Z4K8 759 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 OR5H2Q8NGV7 314 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 NLE1Q9NVX2 485 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-217ENST00000602723 SMOXQ9NWM0 555 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 PRODH2Q9UF12 536 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF225Q9UK10 706 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 OR6C6A6NF89 314 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 GABRA3P34903 492 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 CLCN2P51788 898 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 NKX6-1P78426 367 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-217ENST00000602723 AKR1C8PQ5T2L2 129 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 CARD17Q5XLA6 110 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 GTPBP8Q8N3Z3 284 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-217ENST00000602723 OR51A7Q8NH64 312 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 CHPT1Q8WUD6 406 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 TCTEX1D2Q8WW35 142 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 CNOT9Q92600 299 aaKnown RBP9.2□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF175Q9Y473 711 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 F8W036 122 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 SYNGR4O95473 234 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 TFP02787 698 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF84P51523 738 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 BLOC1S1P78537 153 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 MRPL49Q13405 166 aaKnown RBP9.2□□□□□ -0.94
CSMD1-217ENST00000602723 PNCKQ6P2M8 343 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 SLC9B2Q86UD5 537 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 NRROSQ86YC3 692 aa9.2□□□□□ -0.94
CSMD1-217ENST00000602723 CPED1A4D0V7 1026 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 EVI2BP34910 448 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 SNTB2Q13425 540 aaKnown RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 MALSU1Q96EH3 234 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 OR14A2Q96R54 314 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PEBP4Q96S96 227 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 KLHL21Q9UJP4 597 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PCTPQ9UKL6 214 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 IRS2Q9Y4H2 1338 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 MDFIC2A0A1B0GVS7 189 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF254O75437 659 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 RAB8AP61006 207 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 CRTAC1Q9NQ79 661 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 NFS1Q9Y697 457 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 EEF1E1-BLOC1S5C9J1V9 151 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 H7BY64 318 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PEX12O00623 359 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 INPPL1O15357 1258 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 AMY2AP04746 511 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 MEF2AQ02078 507 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 BATFQ16520 125 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ZFAND4Q86XD8 727 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TEX26Q8N6G2 289 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 Q8N9G6 341 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 CPT1CQ8TCG5 803 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PRAP1Q96NZ9 151 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 C11orf84Q9BUA3 381 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 SEZ6LQ9BYH1 1024 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ZBTB20Q9HC78 741 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 CNOT4O95628 575 aaKnown RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ADH1BP00325 375 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 KLK3P07288 261 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ZBTB48P10074 688 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 KCNQ1P51787 676 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 SSTP61278 116 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TLE3Q04726 772 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TXNDC8Q6A555 127 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF442Q9H7R0 627 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 CCDC163A0A0D9SF12 145 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 CFHP08603 1231 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 MOGSQ13724 837 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 SGCAQ16586 387 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 METTL27Q8N6F8 245 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TRIB2Q92519 343 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 RBCK1Q9BYM8 510 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 BCO2Q9BYV7 579 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 SLC28A3Q9HAS3 691 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PLEKHA3Q9HB20 300 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TMEM248Q9NWD8 314 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PTGDR2Q9Y5Y4 395 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PRAMEF11O60813 436 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 CRYZL1O95825 349 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 MAOAP21397 527 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 HTR1EP28566 365 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PTPN6P29350 595 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PLEKHS1Q5SXH7 462 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TPRG1Q6ZUI0 275 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TREML1Q86YW5 311 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PLD6Q8N2A8 252 aaKnown RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 FAM46AQ96IP4 442 aaKnown RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 OARD1Q9Y530 152 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 SLC22A31A6NKX4 558 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ARPC5O15511 151 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TYROBPO43914 113 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PER3P56645 1201 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 UBXN2BQ14CS0 331 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 BLOC1S3Q6QNY0 202 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ASRGL1Q7L266 308 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ARHGAP12Q8IWW6 846 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 GLIS1Q8NBF1 620 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 FZD8Q9H461 694 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TAF1P21675 1872 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms