RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 UTS2RQ9UKP6 389 aa11.04□□□□□ -0.64
VRK3-223ENST00000601341 VPS4AQ9UN37 437 aa11.04□□□□□ -0.64
VRK3-223ENST00000601341 TOX3O15405 576 aaPredicted RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 FLRT2O43155 660 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SH3BP5O60239 455 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SNRNP200O75643 2136 aaKnown RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 CLPXO76031 633 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 KLHL18O94889 574 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ZNF682O95780 498 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ANGPTL1O95841 491 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 IL7RP16871 459 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ZNF10P21506 573 aaPredicted RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 HIST1H1TP22492 207 aaPredicted RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 ATP5A1P25705 553 aaKnown RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 CSF2RBP32927 897 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 MLLT3P42568 568 aaPredicted RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 ARL4DP49703 201 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ENTPD1P49961 510 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 RAB8AP61006 207 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 TRA2BP62995 288 aaKnown RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 SLC35A2P78381 396 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 CFHR1Q03591 330 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 FADDQ13158 208 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SLC14A1Q13336 389 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SLC9A5Q14940 896 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 TMEM71Q6P5X7 295 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ABHD13Q7L211 337 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 PRSS42Q7Z5A4 293 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 CYP4Z1Q86W10 505 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 KMT5CQ86Y97 462 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SLC30A8Q8IWU4 369 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 HS3ST5Q8IZT8 346 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SVOPQ8N4V2 548 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 NATD1Q8N6N6 113 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ACOT4Q8N9L9 421 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ZFP90Q8TF47 636 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 TEFMQ96QE5 360 aaKnown RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 ZNF347Q96SE7 839 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 DPYSL5Q9BPU6 564 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 LRFN3Q9BTN0 628 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 RAD21L1Q9H4I0 556 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 REEP4Q9H6H4 257 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 REEP1Q9H902 201 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 NECTIN3Q9NQS3 549 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 PRDM7Q9NQW5 492 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 PLCL2Q9UPR0 1127 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 BTBD3Q9Y2F9 522 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 PCDHGB3Q9Y5G1 929 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 MYO15AQ9UKN7 3530 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 A0A0A6YYD5 115 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 A0A0G2JN53 185 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 GABRR3A8MPY1 467 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ZNF99A8MXY4 864 aaPredicted RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 ADAMDEC1O15204 470 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SLC22A1O15245 554 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 P2RX6O15547 441 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SUV39H1O43463 412 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 GUCY1B2O75343 617 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 RPLP0P05388 317 aaKnown RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 LAMP1P11279 417 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 STT3AP46977 705 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 DAPP51397 102 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 BTN3A2P78410 334 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 HSD11B2P80365 405 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 C2orf80Q0P641 193 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 TCF15Q12870 199 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 RAPSNQ13702 412 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 PDE7AQ13946 482 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 HEPACAMQ14CZ8 416 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 RGNQ15493 299 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 CLPPQ16740 277 aaPredicted RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 IQCCQ4KMZ1 466 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 MLIPQ5VWP3 458 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 FAM71E1Q6IPT2 247 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ZNF793Q6ZN11 406 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 Q6ZNX1 250 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 OR8K5Q8NH50 307 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 IFI44Q8TCB0 444 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 UTP15Q8TED0 518 aaKnown RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 TM4SF18Q96CE8 201 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 HSH2DQ96JZ2 352 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 NUDT22Q9BRQ3 303 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 DOHHQ9BU89 302 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 GABARAPL3Q9BY60 117 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 IRF2BPLQ9H1B7 796 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 LRRN3Q9H3W5 708 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 TMEM38AQ9H6F2 299 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 ABCG2Q9UNQ0 655 aa11.03□□□□□ -0.64
VRK3-223ENST00000601341 SAMHD1Q9Y3Z3 626 aaKnown RBP11.03□□□□□ -0.64
VRK3-223ENST00000601341 C4orf51C9J302 202 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 HCRTR1O43613 425 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 TMPRSS11DO60235 418 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 CBFA2T3O75081 653 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 GABARAPO95166 117 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 LDOC1O95751 146 aaPredicted RBP11.02□□□□□ -0.65
VRK3-223ENST00000601341 IL3P08700 152 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 ZNF888P0CJ79 500 aaPredicted RBP11.02□□□□□ -0.65
VRK3-223ENST00000601341 SMIM10L1P0DMW3 83 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 DDX5P17844 614 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms