RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 GIMAP5Q96F15 307 aa21.4■■□□□ 1.02
IRF3-227ENST00000600911 ANKRD27Q96NW4 1050 aa21.4■■□□□ 1.02
IRF3-227ENST00000600911 VPS4AQ9UN37 437 aa21.4■■□□□ 1.02
IRF3-227ENST00000600911 RNF103-CHMP3A0A140T963 221 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 C17orf105B2RV13 164 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 ZCCHC18P0CG32 403 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 DDX5P17844 614 aaKnown RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 WT1P19544 449 aaPredicted RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 HOXD11P31277 338 aaPredicted RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 FOLR3P41439 243 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 PGDP52209 483 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 RPS26P62854 115 aaKnown RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 ZNF267Q14586 743 aaPredicted RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 TBC1D25Q3MII6 688 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 WDR53Q7Z5U6 358 aaPredicted RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 GALNT12Q8IXK2 581 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 RIT1Q92963 219 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 TMEM125Q96AQ2 219 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 OTUB1Q96FW1 271 aaPredicted RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 RBM18Q96H35 190 aaKnown RBP21.39■■□□□ 1.01
IRF3-227ENST00000600911 TUBB6Q9BUF5 446 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 NEUROD4Q9HD90 331 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 PCDHGB4Q9UN71 923 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 ERVK-19Q9WJR5 959 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 MSRB2Q9Y3D2 182 aa21.39■■□□□ 1.01
IRF3-227ENST00000600911 ANKRD65E5RJM6 399 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 PLOD2O00469 737 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 NME4O00746 187 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 SOCS6O14544 535 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 TLX3O43711 291 aaPredicted RBP21.38■■□□□ 1.01
IRF3-227ENST00000600911 DDAH2O95865 285 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 LIPCP11150 499 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 UQCRC2P22695 453 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 PTPN4P29074 926 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 CCT3P49368 545 aaKnown RBP21.38■■□□□ 1.01
IRF3-227ENST00000600911 OR4D2P58180 307 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 MAP4K2Q12851 820 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 ASRGL1Q7L266 308 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 PPP1R32Q7Z5V6 425 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 SLC15A3Q8IY34 581 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 OR2L13Q8N349 312 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 IL22RA1Q8N6P7 574 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 C16orf58Q96GQ5 468 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 CLPTM1LQ96KA5 538 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 TPT1P8Q9HAU6 139 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 ADAP2Q9NPF8 381 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.38■■□□□ 1.01
IRF3-227ENST00000600911 DTX4Q9Y2E6 619 aa21.38■■□□□ 1.01
IRF3-227ENST00000600911 SEC24DO94855 1032 aaPredicted RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 KRT16P08779 473 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 LIFP15018 202 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 SLC7A2P52569 658 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 PRKAG1P54619 331 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 PCOLCEQ15113 449 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 ELAVL1Q15717 326 aaKnown RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 SAXO2Q658L1 398 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 SZRD1Q7Z422 152 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 PGAM4Q8N0Y7 254 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 VWA5B2Q8N398 1253 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 NFAM1Q8NET5 270 aaPredicted RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 NAF1Q96HR8 494 aaKnown RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 BTBD10Q9BSF8 475 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 CNPPD1Q9BV87 410 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 CADM1Q9BY67 442 aaKnown RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 ZCCHC3Q9NUD5 404 aaKnown RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 GID8Q9NWU2 228 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 C21orf140B9A014 251 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 CLIC1O00299 241 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 PRKNO60260 465 aaPredicted RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 PSMG1O95456 288 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 TNNI3P19429 210 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 RPS15P62841 145 aaKnown RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 LRRC74AQ0VAA2 488 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 CLN3Q13286 438 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 TP53BP2Q13625 1128 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.37■■□□□ 1.01
IRF3-227ENST00000600911 KIRREL2Q6UWL6 708 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 TMEM64Q6YI46 380 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 C6orf120Q7Z4R8 191 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 CPEB2Q7Z5Q1 589 aaKnown RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 YTHDF3Q7Z739 585 aaKnown RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 RNF148Q8N7C7 305 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 NUP43Q8NFH3 380 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 OR52R1Q8NGF1 315 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 FBXO30Q8TB52 745 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 ZNF721Q8TF20 911 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 ZNF578Q96N58 590 aaPredicted RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 YIPF4Q9BSR8 244 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 C1orf21Q9H246 121 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 NTMQ9P121 344 aa21.37■■□□□ 1.01
IRF3-227ENST00000600911 ZNF223Q9UK11 482 aaPredicted RBP21.37■■□□□ 1.01
IRF3-227ENST00000600911 LOC102723996A0A087X1L8 192 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 EMC8O43402 210 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 PLOD3O60568 738 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 OTX2P32243 289 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 GALNSP34059 522 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 GPR143P51810 404 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 MNAT1P51948 309 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 FUT7Q11130 342 aa21.36■■□□□ 1.01
IRF3-227ENST00000600911 PAPD4Q6PIY7 484 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms