RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 GRAMD1BQ3KR37 738 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF628Q5EBL2 1059 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 CRB2Q5IJ48 1285 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 MED25Q71SY5 747 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 OR2L13Q8N349 312 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 METTL27Q8N6F8 245 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 OR7G2Q8NG99 324 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF675Q8TD23 568 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 RHBDD1Q8TEB9 315 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 SLC38A5Q8WUX1 472 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 DDX18Q9NVP1 670 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 A0A087WV62 115 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 LDLRP01130 860 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 GP1BAP07359 652 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF806P0C7X5 589 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 NT5EP21589 574 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 ACP1P24666 158 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 HSD17B7P56937 341 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 PCBP3P57721 371 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 SLC13A2Q13183 592 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 LASP1Q14847 261 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 SYT16Q17RD7 645 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 PATL1Q86TB9 770 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 RAB8BQ92930 207 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 P2RX2Q9UBL9 471 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 SRPK3Q9UPE1 567 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 SUV39H1O43463 412 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 AQP1P29972 269 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 CLCN2P51788 898 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 IGLV3-21P80748 117 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 STX4Q12846 297 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 BIKQ13323 160 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 TRA2AQ13595 282 aaKnown RBP eCLIP16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 CYBRD1Q53TN4 286 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 FKBP9P1Q75LS8 142 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 GALNT10Q86SR1 603 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 RCBTB1Q8NDN9 531 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 XAGE5Q8WWM1 108 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 EME1Q96AY2 570 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 GIMAP5Q96F15 307 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 MS4A4EQ96PG1 132 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 BDH2Q9BUT1 245 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 ACTRT3Q9BYD9 372 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 RBCK1Q9BYM8 510 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 DHCR7Q9UBM7 475 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 SCOCQ9UIL1 159 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 C19orf53Q9UNZ5 99 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 DTNAQ9Y4J8 743 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 MAU2Q9Y6X3 613 aa16.54■□□□□ 0.24
SHKBP1-224ENST00000600718 EIF4E1BA6NMX2 242 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 M0QX08 132 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 CLOCKO15516 846 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 ASNA1O43681 348 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 OR10H2O60403 315 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 PLOD3O60568 738 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 DEAF1O75398 565 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 BCHEP06276 602 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 XCR1P46094 333 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 OR1D4P47884 311 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 CRYBA2P53672 197 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 MAPK10P53779 464 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 SELENOWP63302 87 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 DSG2Q14126 1118 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 ERV3-1Q14264 604 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 GNA13Q14344 377 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 PRICKLE4Q2TBC4 344 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 FHL5Q5TD97 284 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 PRAMEF17Q5VTA0 474 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 SLITRK4Q8IW52 837 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 LGI4Q8N135 537 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 C16orf58Q96GQ5 468 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 OR1F2PQ96R84 312 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF184Q99676 751 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 DOHHQ9BU89 302 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF304Q9HCX3 659 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 CNOT11Q9UKZ1 510 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 MYOCOSA0A1B0GUC4 107 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 A0A1B0GX78 115 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 FAM149AA5PLN7 773 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 DUXAA6NLW8 204 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 D6RAR5 112 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 MT-ND1P03886 318 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 SOX18P35713 384 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 MGAT2Q10469 447 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 MAP4K2Q12851 820 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 PHF19Q5T6S3 580 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 FAM111BQ6SJ93 734 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 IZUMO2Q6UXV1 221 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 KBTBD2Q8IY47 623 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 ST13P4Q8IZP2 240 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 OR5D16Q8NGK9 328 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 LZICQ8WZA0 190 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 TMEM19Q96HH6 336 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 OR6C1Q96RD1 312 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 YIPF4Q9BSR8 244 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 ANKRA2Q9H9E1 313 aa16.53■□□□□ 0.24
SHKBP1-224ENST00000600718 MAT2BQ9NZL9 334 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms