RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TMEM102Q8N9M5 508 aaPredicted RBP17.56■□□□□ 0.4
CCDC9-205ENST00000600117 OR9I1Q8NGQ6 314 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 OR14A16Q8NHC5 309 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 DOK4Q8TEW6 326 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 FER1L6-AS2Q96M78 137 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 BBS4Q96RK4 519 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 GLIPR2Q9H4G4 154 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 RABEP2Q9H5N1 569 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 CXorf21Q9HAI6 301 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 KCNMB2Q9Y691 235 aa17.56■□□□□ 0.4
CCDC9-205ENST00000600117 C17orf105B2RV13 164 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 SLC22A3O75751 556 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 TNNI3P19429 210 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 NTSP30990 170 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 CLNS1AP54105 237 aaKnown RBP17.55■□□□□ 0.4
CCDC9-205ENST00000600117 WNT3P56703 355 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 PHC1P78364 1004 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 CHAF1BQ13112 559 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 PRICKLE4Q2TBC4 344 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 SPANXN4Q5MJ08 99 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 PLAG1Q6DJT9 500 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 PAOXQ6QHF9 649 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 PIGWQ7Z7B1 504 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 B3GNT7Q8NFL0 401 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 OR8J2Q8NGG1 315 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 DAZLQ92904 295 aaKnown RBP17.55■□□□□ 0.4
CCDC9-205ENST00000600117 AMDHD1Q96NU7 426 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 PRPF18Q99633 342 aaKnown RBP17.55■□□□□ 0.4
CCDC9-205ENST00000600117 BHLHE41Q9C0J9 482 aaPredicted RBP17.55■□□□□ 0.4
CCDC9-205ENST00000600117 ATAD3AQ9NVI7 634 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 MAT2BQ9NZL9 334 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 TRIM33Q9UPN9 1127 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 CLCA3PQ9Y6N3 262 aa17.55■□□□□ 0.4
CCDC9-205ENST00000600117 HRKO00198 91 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 SCN2BO60939 215 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 IGKV3-11P04433 115 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 DDX5P17844 614 aaKnown RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 NCF2P19878 526 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 EFNA1P20827 205 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 S1PR1P21453 382 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 NT5EP21589 574 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 MPIP34949 423 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 NCBP2P52298 156 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 RRADP55042 308 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 STX1BP61266 288 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 MAP4K2Q12851 820 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 SQLEQ14534 574 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 EXT1Q16394 746 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 BTBD16Q32M84 506 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 PGS1Q32NB8 556 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 LACTB2Q53H82 288 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF628Q5EBL2 1059 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 OR4F3Q6IEY1 312 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 FAM111BQ6SJ93 734 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 FUNDC1Q8IVP5 155 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 APLFQ8IW19 511 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 GALNT12Q8IXK2 581 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 CPSF7Q8N684 471 aaKnown RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF321PQ8N8H1 164 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 GLB1L3Q8NCI6 653 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 APCDD1LQ8NCL9 501 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 MORN4Q8NDC4 146 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ADCY4Q8NFM4 1077 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 OR9A2Q8NGT5 310 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 M1APQ8TC57 530 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 SLC2A12Q8TD20 617 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF675Q8TD23 568 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF721Q8TF20 911 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 RIT1Q92963 219 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 CTHRC1Q96CG8 243 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ABHD17AQ96GS6 310 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 SENP5Q96HI0 755 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 FBXL20Q96IG2 436 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 DUSP26Q9BV47 211 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ATP13A2Q9NQ11 1180 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ACSS1Q9NUB1 689 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF639Q9UID6 485 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF223Q9UK11 482 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-205ENST00000600117 FBN2P35556 2912 aa17.54■□□□□ 0.4
CCDC9-205ENST00000600117 CLPSP04118 112 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 SERPINA7P05543 415 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 CD1EP15812 388 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 PGDP52209 483 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 DGKQP52824 942 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 SOX8P57073 446 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 SRSF11Q05519 484 aaKnown RBP17.53■□□□□ 0.4
CCDC9-205ENST00000600117 KLRB1Q12918 225 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 AIMP2Q13155 320 aaKnown RBP17.53■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF267Q14586 743 aaPredicted RBP17.53■□□□□ 0.4
CCDC9-205ENST00000600117 DPY19L1Q2PZI1 675 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 FAM174BQ3ZCQ3 159 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 ZNF551Q7Z340 670 aaPredicted RBP17.53■□□□□ 0.4
CCDC9-205ENST00000600117 NATD1Q8N6N6 113 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 ELP5Q8TE02 316 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 APOBEC4Q8WW27 367 aaKnown RBP17.53■□□□□ 0.4
CCDC9-205ENST00000600117 NCLNQ969V3 563 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 ZBED6CLQ96FA7 236 aaPredicted RBP17.53■□□□□ 0.4
CCDC9-205ENST00000600117 CCT8L2Q96SF2 557 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 NUDT9Q9BW91 350 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 ING2Q9H160 280 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms